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LOC662866 venom acid phosphatase Acph-1 [ Tribolium castaneum (red flour beetle) ]

Gene ID: 662866, updated on 12-Apr-2024

Summary

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Gene symbol
LOC662866
Gene description
venom acid phosphatase Acph-1
Locus tag
TcasGA2_TC001161
Gene type
protein coding
RefSeq status
MODEL
Organism
Tribolium castaneum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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Genomic context

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See LOC662866 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 4 NC_087397.1 (2982449..2983990, complement)
103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG2 NC_007417.3 (12116276..12117816)

Chromosome 4 - NC_087397.1Genomic Context describing neighboring genes Neighboring gene nicotinic Acetylcholine Receptor alpha4 Neighboring gene venom acid phosphatase Acph-1 Neighboring gene venom acid phosphatase Acph-1 Neighboring gene beta-1,4-glucuronyltransferase 1 Neighboring gene trypsin-1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
  2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
venom acid phosphatase Acph-1
Names
AUGUSTUS-3.0.2_01161
GLEAN_01161
Venom acid phosphatase Acph-1-like Protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icTriCast1.1 Primary Assembly

Genomic

  1. NC_087397.1 Reference icTriCast1.1 Primary Assembly

    Range
    2982449..2983990 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_968941.4 → XP_974034.1  venom acid phosphatase Acph-1

    See identical proteins and their annotated locations for XP_974034.1

    UniProtKB/TrEMBL
    D6WAI1
    Conserved Domains (1) summary
    cd07061
    Location:25 → 322
    HP_HAP_like; Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction
Nucleotide Protein Strain
Heading Accession and Version

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