U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

msl-3 male-specific lethal 3 [ Drosophila virilis ]

Gene ID: 6622962, updated on 23-May-2024

Summary

Go to the top of the page Help
Gene symbol
msl-3
Gene description
male-specific lethal 3
Locus tag
Dvir_GJ13317
See related
EnsemblRapid:LOC6622962
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila virilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
Also known as
GJ13317; msl-3-PB; Dvir\msl-3; GJ13317-PB
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See msl-3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
103 current DvirRS2 (GCF_003285735.1) Unplaced Scaffold NW_022587564.1 (12447993..12451446, complement)

NW_022587564.1Genomic Context describing neighboring genes Neighboring gene inverted formin-2 Neighboring gene OXA1L mitochondrial inner membrane protein Neighboring gene snake venom serine protease Haly-2 Neighboring gene Bardet-Biedl syndrome 1 Neighboring gene Acyl-CoA binding protein 4

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_022587564 Unplaced Scaffold Reference DvirRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Origin and evolution of the regulatory gene male-specific lethal-3. Marín I, et al. Mol Biol Evol, 2000 Aug. PMID 10908644
  2. The dosage compensation system of Drosophila is co-opted by newly evolved X chromosomes. Marín I, et al. Nature, 1996 Sep 12. PMID 8774878
  3. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of MSL complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of NuA4 histone acetyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein male-specific lethal-3
Names
Dvir\GJ13317
Dvir\GJ13317-PB
Dvir\msl-3-PB
dvir_GLEANR_13214
male lethal 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Drosophila virilis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DvirRS2

Genomic

  1. NW_022587564.1 Reference DvirRS2

    Range
    12447993..12451446 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032435488.1 → XP_032291379.1  protein male-specific lethal-3 isoform X1

    UniProtKB/Swiss-Prot
    Q9NBL2
    Related
    XP_032291379.1, XM_032435488.1
    Conserved Domains (4) summary
    PRK12678
    Location:80 → 210
    PRK12678; transcription termination factor Rho; Provisional
    TIGR01622
    Location:154 → 253
    SF-CC1; splicing factor, CC1-like family
    pfam05712
    Location:218 → 514
    MRG
    cl28914
    Location:15 → 81
    CD_CSD; CHROMO (CHRromatin Organization Modifier) domains and chromo shadow domains

  2. XM_032435489.1 → XP_032291380.1  protein male-specific lethal-3 isoform X2

    UniProtKB/Swiss-Prot
    Q9NBL2
    UniProtKB/TrEMBL
    B4LHK5
    Related
    XP_032291380.1, XM_032435489.1
    Conserved Domains (4) summary
    PRK12678
    Location:80 → 220
    PRK12678; transcription termination factor Rho; Provisional
    TIGR01622
    Location:154 → 226
    SF-CC1; splicing factor, CC1-like family
    pfam05712
    Location:197 → 490
    MRG
    cl28914
    Location:15 → 81
    CD_CSD; CHROMO (CHRromatin Organization Modifier) domains and chromo shadow domains

  3. XM_032435487.1 → XP_032291378.1  protein male-specific lethal-3 isoform X1

    UniProtKB/Swiss-Prot
    Q9NBL2
    Related
    XP_032291378.1, XM_032435487.1
    Conserved Domains (4) summary
    PRK12678
    Location:80 → 210
    PRK12678; transcription termination factor Rho; Provisional
    TIGR01622
    Location:154 → 253
    SF-CC1; splicing factor, CC1-like family
    pfam05712
    Location:218 → 514
    MRG
    cl28914
    Location:15 → 81
    CD_CSD; CHROMO (CHRromatin Organization Modifier) domains and chromo shadow domains
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Miscellaneous