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LOC662258 acetylcholinesterase 1 [ Tribolium castaneum (red flour beetle) ]

Gene ID: 662258, updated on 12-Apr-2024

Summary

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Gene symbol
LOC662258
Gene description
acetylcholinesterase 1
Locus tag
TcasGA2_TC014402
See related
BEETLEBASE:TC014402
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Tribolium castaneum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
Also known as
AChE-1; AP-Ace
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Genomic context

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Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 5 NC_087398.1 (5439663..5459945, complement)
103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG5 NC_007420.3 (10130625..10149784)

Chromosome 5 - NC_087398.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC662374 Neighboring gene Vacuolar protein sorting 52 Neighboring gene ATP-binding cassette sub-family C member 4 Neighboring gene DNA replication complex GINS protein Sld5 Neighboring gene PH domain leucine-rich repeat protein phosphatase Neighboring gene cysteine-rich secretory protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
  2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetylcholine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in choline metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylcholinesterase 1
Names
GLEAN_14402
NP_001280548.1
XP_008193833.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001293619.1 → NP_001280548.1  acetylcholinesterase 1 precursor

    See identical proteins and their annotated locations for NP_001280548.1

    Status: PROVISIONAL

    Source sequence(s)
    HQ260968
    UniProtKB/TrEMBL
    E7DN61
    Conserved Domains (2) summary
    COG0657
    Location:165 → 270
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
    pfam00135
    Location:68 → 594
    COesterase; Carboxylesterase family

RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icTriCast1.1 Primary Assembly

Genomic

  1. NC_087398.1 Reference icTriCast1.1 Primary Assembly

    Range
    5439663..5459945 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008195611.3 → XP_008193833.1  acetylcholinesterase 1 isoform X1

    See identical proteins and their annotated locations for XP_008193833.1

    UniProtKB/TrEMBL
    D6WLS4
    Conserved Domains (2) summary
    COG0657
    Location:165 → 270
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
    pfam00135
    Location:68 → 594
    COesterase; Carboxylesterase family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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