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SPoCk secretory pathway calcium atpase [ Drosophila virilis ]

Gene ID: 6622127, updated on 23-May-2024

Summary

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Gene symbol
SPoCk
Gene description
secretory pathway calcium atpase
Locus tag
Dvir_GJ11786
See related
EnsemblRapid:LOC6622127
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila virilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
Also known as
GJ11786; GJ11786-PA; GJ11786-PB; GJ11786-PC; GJ11786-PD; GJ11786-PE; GJ11786-PF; GJ11786-PG; GJ11786-PH
Orthologs
fruit fly all
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Genomic context

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See SPoCk in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
103 current DvirRS2 (GCF_003285735.1) Unplaced Scaffold NW_022587564.1 (7655906..7731310)

NW_022587564.1Genomic Context describing neighboring genes Neighboring gene lethal (3) 04053 Neighboring gene ras-GEF domain-containing family member 1B Neighboring gene uncharacterized LOC26531303 Neighboring gene uncharacterized LOC26531097 Neighboring gene uncharacterized LOC6622128

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022587564 Unplaced Scaffold Reference DvirRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables P-type calcium transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in manganese ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium-transporting ATPase type 2C member 1
Names
Dvir\GJ11786
Dvir\GJ11786-PA
Dvir\GJ11786-PB
Dvir\GJ11786-PC
Dvir\GJ11786-PD
Dvir\GJ11786-PE
Dvir\GJ11786-PF
Dvir\GJ11786-PG
Dvir\GJ11786-PH
dvir_GLEANR_11800

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila virilis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DvirRS2

Genomic

  1. NW_022587564.1 Reference DvirRS2

    Range
    7655906..7731310
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015175133.2 → XP_015030619.1  calcium-transporting ATPase type 2C member 1 isoform X1

    UniProtKB/TrEMBL
    B4LDX9
    Related
    XP_015030619.1, XM_015175133.2
    Conserved Domains (6) summary
    TIGR01522
    Location:143 → 1022
    ATPase-IIA2_Ca; golgi membrane calcium-translocating P-type ATPase
    COG4087
    Location:669 → 798
    COG4087; Soluble P-type ATPase [General function prediction only]
    pfam00122
    Location:224 → 458
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:847 → 1019
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:145 → 212
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam13246
    Location:529 → 612
    Cation_ATPase; Cation transport ATPase (P-type)

  2. XM_002047644.3 → XP_002047680.1  calcium-transporting ATPase type 2C member 1 isoform X1

    See identical proteins and their annotated locations for XP_002047680.1

    UniProtKB/TrEMBL
    B4LDX9
    Related
    XP_002047680.1, XM_002047644.3
    Conserved Domains (6) summary
    TIGR01522
    Location:143 → 1022
    ATPase-IIA2_Ca; golgi membrane calcium-translocating P-type ATPase
    COG4087
    Location:669 → 798
    COG4087; Soluble P-type ATPase [General function prediction only]
    pfam00122
    Location:224 → 458
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:847 → 1019
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:145 → 212
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam13246
    Location:529 → 612
    Cation_ATPase; Cation transport ATPase (P-type)

  3. XM_015175130.2 → XP_015030616.1  calcium-transporting ATPase type 2C member 1 isoform X2

    UniProtKB/TrEMBL
    A0A0Q9WJU5
    Related
    XP_015030616.1, XM_015175130.2
    Conserved Domains (6) summary
    TIGR01522
    Location:90 → 969
    ATPase-IIA2_Ca; golgi membrane calcium-translocating P-type ATPase
    COG4087
    Location:616 → 745
    COG4087; Soluble P-type ATPase [General function prediction only]
    pfam00122
    Location:171 → 405
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:794 → 966
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:92 → 159
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam13246
    Location:476 → 559
    Cation_ATPase; Cation transport ATPase (P-type)

  4. XM_015175131.2 → XP_015030617.1  calcium-transporting ATPase type 2C member 1 isoform X4

    UniProtKB/TrEMBL
    A0A0Q9WJE3
    Related
    XP_015030617.1, XM_015175131.2
    Conserved Domains (6) summary
    TIGR01522
    Location:31 → 910
    ATPase-IIA2_Ca; golgi membrane calcium-translocating P-type ATPase
    COG4087
    Location:557 → 686
    COG4087; Soluble P-type ATPase [General function prediction only]
    pfam00122
    Location:112 → 346
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:735 → 907
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:33 → 100
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam13246
    Location:417 → 500
    Cation_ATPase; Cation transport ATPase (P-type)

  5. XM_015175129.2 → XP_015030615.1  calcium-transporting ATPase type 2C member 1 isoform X6

    UniProtKB/TrEMBL
    A0A0Q9WSV2
    Related
    XP_015030615.1, XM_015175129.2
    Conserved Domains (1) summary
    cd02085
    Location:36 → 881
    P-type_ATPase_SPCA; golgi-associated secretory pathway Ca(2+) transport ATPases, similar to human ATPase secretory pathway Ca(2+) transporting 1/hSPCA1 and Saccharomyces cerevisiae Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p

  6. XM_032434952.1 → XP_032290843.1  calcium-transporting ATPase type 2C member 1 isoform X6

    UniProtKB/TrEMBL
    A0A0Q9WSV2
    Related
    XP_032290843.1, XM_032434952.1
    Conserved Domains (1) summary
    cd02085
    Location:36 → 881
    P-type_ATPase_SPCA; golgi-associated secretory pathway Ca(2+) transport ATPases, similar to human ATPase secretory pathway Ca(2+) transporting 1/hSPCA1 and Saccharomyces cerevisiae Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p

  7. XM_015175132.2 → XP_015030618.1  calcium-transporting ATPase type 2C member 1 isoform X3

    UniProtKB/TrEMBL
    A0A0Q9WWF4
    Related
    XP_015030618.1, XM_015175132.2
    Conserved Domains (6) summary
    TIGR01522
    Location:43 → 922
    ATPase-IIA2_Ca; golgi membrane calcium-translocating P-type ATPase
    COG4087
    Location:569 → 698
    COG4087; Soluble P-type ATPase [General function prediction only]
    pfam00122
    Location:124 → 358
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:747 → 919
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:45 → 112
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam13246
    Location:429 → 512
    Cation_ATPase; Cation transport ATPase (P-type)

  8. XM_015175128.2 → XP_015030614.1  calcium-transporting ATPase type 2C member 1 isoform X3

    UniProtKB/TrEMBL
    A0A0Q9WWF4
    Related
    XP_015030614.1, XM_015175128.2
    Conserved Domains (6) summary
    TIGR01522
    Location:43 → 922
    ATPase-IIA2_Ca; golgi membrane calcium-translocating P-type ATPase
    COG4087
    Location:569 → 698
    COG4087; Soluble P-type ATPase [General function prediction only]
    pfam00122
    Location:124 → 358
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:747 → 919
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:45 → 112
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam13246
    Location:429 → 512
    Cation_ATPase; Cation transport ATPase (P-type)

  9. XM_015175134.2 → XP_015030620.1  calcium-transporting ATPase type 2C member 1 isoform X5

    UniProtKB/TrEMBL
    A0A0Q9WKX5
    Related
    XP_015030620.1, XM_015175134.2
    Conserved Domains (1) summary
    cd02085
    Location:52 → 897
    P-type_ATPase_SPCA; golgi-associated secretory pathway Ca(2+) transport ATPases, similar to human ATPase secretory pathway Ca(2+) transporting 1/hSPCA1 and Saccharomyces cerevisiae Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p
Nucleotide Protein Strain
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