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Prosalpha4T1 Proteasome alpha4 subunit, Testis-specific 1 [ Drosophila sechellia ]

Gene ID: 6619222, updated on 16-May-2024

Summary

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Gene symbol
Prosalpha4T1
Gene description
Proteasome alpha4 subunit, Testis-specific 1
Locus tag
Dsec_GM23164
See related
EnsemblRapid:LOC6619222
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila sechellia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GM23164; alpha4t1; Pros28.1A; GM23164-PA
Orthologs
fruit fly all
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Genomic context

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See Prosalpha4T1 in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM438219v1 (GCF_004382195.1) 3R NC_045952.1 (7866916..7868001)

Chromosome 3R - NC_045952.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein R Neighboring gene uncharacterized LOC116801824 Neighboring gene uncharacterized LOC6619219 Neighboring gene putative thiamine transporter SLC35F3 Neighboring gene phenoloxidase-activating factor 3 Neighboring gene CLIP domain-containing serine protease 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045952.1 Chromosome 3R Reference ASM438219v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Rapid evolution through gene duplication and subfunctionalization of the testes-specific alpha4 proteasome subunits in Drosophila. Torgerson DG, et al. Genetics, 2004 Nov. PMID 15579695, Free PMC Article
  2. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex, alpha-subunit complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proteasome subunit alpha type-7-1A
Names
Dsec\GM23164
Dsec\GM23164-PA
Dsec\Pros28.1A
Dsec\Pros28.1A-PA
Pros28.1A-PA
dsec_GLEANR_6004

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM438219v1

Genomic

  1. NC_045952.1 Reference ASM438219v1

    Range
    7866916..7868001
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002043405.2 → XP_002043441.1  proteasome subunit alpha type-7-1A

    See identical proteins and their annotated locations for XP_002043441.1

    UniProtKB/TrEMBL
    Q6QH13
    Related
    XP_002043441.1, XM_002043405.2
    Conserved Domains (2) summary
    PRK03996
    Location:5 → 239
    PRK03996; proteasome subunit alpha; Provisional
    cd03755
    Location:5 → 213
    proteasome_alpha_type_7; proteasome_alpha_type_7. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on ...
Nucleotide Protein Strain
Heading Accession and Version

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