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LOC6615997 pleckstrin homology domain-containing family F member 1 homolog [ Drosophila sechellia ]

Gene ID: 6615997, updated on 10-May-2024

Summary

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Gene symbol
LOC6615997
Gene description
pleckstrin homology domain-containing family F member 1 homolog
Locus tag
Dsec_GM19146
See related
EnsemblRapid:LOC6615997
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila sechellia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GM19146; GM19146-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6615997 in Genome Data Viewer
Location:
chromosome: X
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM438219v1 (GCF_004382195.1) X NC_045954.1 (1424309..1426859)

Chromosome X - NC_045954.1Genomic Context describing neighboring genes Neighboring gene trypsin alpha-3 Neighboring gene RAS oncogene family member Rab27 Neighboring gene uncharacterized LOC6615996 Neighboring gene small nucleolar RNA snoM1 Neighboring gene stubarista 40S ribosomal protein SA Neighboring gene NMDA receptor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045954.1 Chromosome X Reference ASM438219v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pleckstrin homology domain-containing family F member 1 homolog
Names
Dsec\GM19146
Dsec\GM19146-PA
dsec_GLEANR_20736

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM438219v1

Genomic

  1. NC_045954.1 Reference ASM438219v1

    Range
    1424309..1426859
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002040328.2 → XP_002040364.1  pleckstrin homology domain-containing family F member 1 homolog

    See identical proteins and their annotated locations for XP_002040364.1

    UniProtKB/TrEMBL
    B4I9F4
    Related
    XP_002040364.1, XM_002040328.2
    Conserved Domains (3) summary
    cd01218
    Location:7 → 129
    PH_Phafin2-like; Phafin2 (also called EAPF, FLJ13187, ZFYVE18 or PLEKHF2) Pleckstrin Homology (PH) domain
    cd15717
    Location:148 → 208
    FYVE_PKHF; FYVE domain found in protein containing both PH and FYVE domains 1 (phafin-1), 2 (phafin-2), and similar proteins
    pfam00169
    Location:39 → 131
    PH; PH domain
Nucleotide Protein Strain
Heading Accession and Version

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