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LOC661462 annulin [ Tribolium castaneum (red flour beetle) ]

Gene ID: 661462, updated on 12-Apr-2024

Summary

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Gene symbol
LOC661462
Gene description
annulin
Locus tag
TcasGA2_TC013508
Gene type
protein coding
RefSeq status
MODEL
Organism
Tribolium castaneum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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Genomic context

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See LOC661462 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 5 NC_087398.1 (6913788..6918258)
103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG5 NC_007420.3 (8664615..8669040, complement)

Chromosome 5 - NC_087398.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 231 Neighboring gene mitochondrial import inner membrane translocase subunit Tim21 Neighboring gene hemocyte protein-glutamine gamma-glutamyltransferase Neighboring gene H15 protein Neighboring gene uncharacterized LOC103313100 Neighboring gene T-box transcription factor TBX20

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
  2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-glutamine gamma-glutamyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptide cross-linking IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
annulin
Names
GLEAN_13508

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icTriCast1.1 Primary Assembly

Genomic

  1. NC_087398.1 Reference icTriCast1.1 Primary Assembly

    Range
    6913788..6918258
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_967617.4 → XP_972710.1  annulin

    See identical proteins and their annotated locations for XP_972710.1

    UniProtKB/TrEMBL
    D6WL51
    Conserved Domains (4) summary
    smart00460
    Location:323 → 415
    TGc; Transglutaminase/protease-like homologues
    COG1305
    Location:326 → 466
    YebA; Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]
    pfam00868
    Location:57 → 179
    Transglut_N; Transglutaminase family
    pfam00927
    Location:534 → 640
    Transglut_C; Transglutaminase family, C-terminal ig like domain
Nucleotide Protein Strain
Heading Accession and Version

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