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YL-1 Vacuolar protein sorting-associated protein YL-1 [ Drosophila sechellia ]

Gene ID: 6612089, updated on 15-May-2024

Summary

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Gene symbol
YL-1
Gene description
Vacuolar protein sorting-associated protein YL-1
Locus tag
Dsec_GM18769
See related
EnsemblRapid:LOC6612089
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila sechellia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GM18769; GM18769-PA
Orthologs
fruit fly all
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Genomic context

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See YL-1 in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
4
Annotation release Status Assembly Chr Location
101 current ASM438219v1 (GCF_004382195.1) 2L NC_045949.1 (10734244..10735646)

Chromosome 2L - NC_045949.1Genomic Context describing neighboring genes Neighboring gene defective proboscis extension response 2 Neighboring gene uncharacterized LOC6612086 Neighboring gene Transmembrane protein 214 Neighboring gene proline-rich proteoglycan 2 Neighboring gene de-etiolated protein 1 abo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045949.1 Chromosome 2L Reference ASM438219v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP-dependent H2AZ histone chaperone activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vacuolar protein sorting-associated protein 72 homolog
Names
Dsec\GM18769
Dsec\GM18769-PA
dsec_GLEANR_2032

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM438219v1

Genomic

  1. NC_045949.1 Reference ASM438219v1

    Range
    10734244..10735646
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002036570.2 → XP_002036606.1  vacuolar protein sorting-associated protein 72 homolog

    See identical proteins and their annotated locations for XP_002036606.1

    UniProtKB/TrEMBL
    B4HWY4
    Related
    XP_002036606.1, XM_002036570.2
    Conserved Domains (3) summary
    smart00993
    Location:276 → 304
    YL1_C; YL1 nuclear protein C-terminal domain
    pfam04180
    Location:20 → 104
    LTV; Low temperature viability protein
    pfam05764
    Location:3 → 218
    YL1; YL1 nuclear protein
Nucleotide Protein Strain
Heading Accession and Version

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