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nAChRalpha6 nicotinic acetylcholine receptor alpha6 [ Drosophila sechellia ]

Gene ID: 6611860, updated on 23-May-2024

Summary

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Gene symbol
nAChRalpha6
Gene description
nicotinic acetylcholine receptor alpha6
Locus tag
Dsec_GM12233
See related
EnsemblRapid:LOC6611860
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila sechellia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GM12233; GM12233-PA
Orthologs
fruit fly all
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Genomic context

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See nAChRalpha6 in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
16
Annotation release Status Assembly Chr Location
101 current ASM438219v1 (GCF_004382195.1) 2L NC_045949.1 (9582587..9673544, complement)

Chromosome 2L - NC_045949.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116800391 Neighboring gene alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 Neighboring gene serendipity locus protein delta Neighboring gene mitochondrial DNA helicase Neighboring gene putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog Neighboring gene cysteine-rich PDZ-binding protein Neighboring gene FK506-binding protein 59kD

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045949.1 Chromosome 2L Reference ASM438219v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine-gated monoatomic cation-selective channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylcholine receptor subunit alpha-type acr-16; neuronal acetylcholine receptor subunit alpha-7
Names
Dsec\GM12233
Dsec\GM12233-PA
dsec_GLEANR_1266

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM438219v1

Genomic

  1. NC_045949.1 Reference ASM438219v1

    Range
    9582587..9673544 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032715807.1 → XP_032571698.1  acetylcholine receptor subunit alpha-type acr-16 isoform X4

    UniProtKB/TrEMBL
    B4HWB0
    Related
    XP_032571698.1, XM_032715807.1
    Conserved Domains (2) summary
    TIGR00860
    Location:11 → 488
    LIC; Cation transporter family protein
    cd18997
    Location:55 → 236
    LGIC_ECD_nAChR; extracellular domain of nicotinic acetylcholine receptor

  2. XM_032715798.1 → XP_032571689.1  neuronal acetylcholine receptor subunit alpha-7 isoform X1

    UniProtKB/TrEMBL
    B4HWB0
    Related
    XP_032571689.1, XM_032715798.1
    Conserved Domains (2) summary
    TIGR00860
    Location:11 → 488
    LIC; Cation transporter family protein
    cd18997
    Location:55 → 236
    LGIC_ECD_nAChR; extracellular domain of nicotinic acetylcholine receptor

  3. XM_032715802.1 → XP_032571693.1  acetylcholine receptor subunit alpha-type acr-16 isoform X2

    UniProtKB/TrEMBL
    B4HWB0
    Related
    XP_032571693.1, XM_032715802.1
    Conserved Domains (2) summary
    TIGR00860
    Location:11 → 488
    LIC; Cation transporter family protein
    cd18997
    Location:55 → 236
    LGIC_ECD_nAChR; extracellular domain of nicotinic acetylcholine receptor

  4. XM_032715805.1 → XP_032571696.1  acetylcholine receptor subunit alpha-type acr-16 isoform X3

    UniProtKB/TrEMBL
    B4HWB0
    Related
    XP_032571696.1, XM_032715805.1
    Conserved Domains (2) summary
    TIGR00860
    Location:11 → 488
    LIC; Cation transporter family protein
    cd18997
    Location:55 → 236
    LGIC_ECD_nAChR; extracellular domain of nicotinic acetylcholine receptor

  5. XM_032715809.1 → XP_032571700.1  acetylcholine receptor subunit alpha-type acr-16 isoform X5

    UniProtKB/TrEMBL
    B4HWB0
    Related
    XP_032571700.1, XM_032715809.1
    Conserved Domains (2) summary
    TIGR00860
    Location:11 → 503
    LIC; Cation transporter family protein
    cd18997
    Location:55 → 251
    LGIC_ECD_nAChR; extracellular domain of nicotinic acetylcholine receptor
Nucleotide Protein Strain
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