U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Usp12-46 Ubiquitin-specific protease 12/46 [ Drosophila sechellia ]

Gene ID: 6607502, updated on 22-May-2024

Summary

Go to the top of the page Help
Gene symbol
Usp12-46
Gene description
Ubiquitin-specific protease 12/46
Locus tag
Dsec_GM26467
See related
EnsemblRapid:LOC6607502
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila sechellia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GM26467; GM26467-PA
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Usp12-46 in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM438219v1 (GCF_004382195.1) 3R NC_045952.1 (21330623..21340133)

Chromosome 3R - NC_045952.1Genomic Context describing neighboring genes Neighboring gene neprilysin-4 Neighboring gene neprilysin-4 Neighboring gene uncharacterized LOC116801535 Neighboring gene uncharacterized LOC6607503 Neighboring gene uncharacterized LOC6607500 Neighboring gene uncharacterized LOC116801533 Neighboring gene uncharacterized LOC116801536 Neighboring gene uncharacterized LOC116801534 Neighboring gene uncharacterized LOC6607501 Neighboring gene putative mediator of RNA polymerase II transcription subunit 12 Neighboring gene putative mediator of RNA polymerase II transcription subunit 12

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_045952.1 Chromosome 3R Reference ASM438219v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ubiquitin carboxyl-terminal hydrolase 12A
Names
Dsec\GM26467
Dsec\GM26467-PA
dsec_GLEANR_9344

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM438219v1

Genomic

  1. NC_045952.1 Reference ASM438219v1

    Range
    21330623..21340133
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032721806.1 → XP_032577697.1  ubiquitin carboxyl-terminal hydrolase 12A

    UniProtKB/TrEMBL
    B4HEU6
    Related
    XP_032577697.1, XM_032721806.1
    Conserved Domains (1) summary
    cd02663
    Location:25 → 419
    Peptidase_C19G; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

  2. XM_002032235.2 → XP_002032271.1  ubiquitin carboxyl-terminal hydrolase 12A

    See identical proteins and their annotated locations for XP_002032271.1

    UniProtKB/TrEMBL
    B4HEU6
    Related
    XP_002032271.1, XM_002032235.2
    Conserved Domains (1) summary
    cd02663
    Location:25 → 419
    Peptidase_C19G; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases