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LOC6603022 T-box transcription factor TBX6 [ Drosophila persimilis ]

Gene ID: 6603022, updated on 10-May-2024

Summary

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Gene symbol
LOC6603022
Gene description
T-box transcription factor TBX6
Locus tag
Dper_GL15033
See related
EnsemblRapid:LOC6603022
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila persimilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GL15033; GL15033-PA
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current DperRS2 (GCF_003286085.1) Unplaced Scaffold NW_020825365.1 (474790..476674)

NW_020825365.1Genomic Context describing neighboring genes Neighboring gene protein Smaug Neighboring gene ubiquitin-protein ligase E3B Neighboring gene T-box-containing protein TBX6L Neighboring gene T-box transcription factor TBX6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825365 Unplaced Scaffold Reference DperRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell fate specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-box transcription factor TBX6
Names
Dper\GL15033
Dper\GL15033-PA
dper_GLEANR_15890

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila persimilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DperRS2

Genomic

  1. NW_020825365.1 Reference DperRS2

    Range
    474790..476674
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002028007.2 → XP_002028043.1  T-box transcription factor TBX6

    See identical proteins and their annotated locations for XP_002028043.1

    UniProtKB/TrEMBL
    B4HB14
    Related
    XP_002028043.1, XM_002028007.2
    Conserved Domains (1) summary
    cd00182
    Location:58 → 245
    TBOX; T-box DNA binding domain of the T-box family of transcriptional regulators. The T-box family is an ancient group that appears to play a critical role in development in all animal species. These genes were uncovered on the basis of similarity to the DNA ...
Nucleotide Protein
Heading Accession and Version

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