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LOC6602016 UV excision repair protein RAD23 homolog A [ Drosophila persimilis ]

Gene ID: 6602016, updated on 10-May-2024

Summary

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Gene symbol
LOC6602016
Gene description
UV excision repair protein RAD23 homolog A
Locus tag
Dper_GL18167
See related
EnsemblRapid:LOC6602016
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila persimilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GL18167; GL18167-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6602016 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current DperRS2 (GCF_003286085.1) Unplaced Scaffold NW_020825329.1 (1033057..1034808)

NW_020825329.1Genomic Context describing neighboring genes Neighboring gene Nuclear factor I Neighboring gene synaptotagmin-7 Neighboring gene Zinc/iron regulated transporter-related protein 102B Neighboring gene Ring finger protein 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825329 Unplaced Scaffold Reference DperRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proteasome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UV excision repair protein RAD23 homolog A
Names
Dper\GL18167
Dper\GL18167-PA
dper_GLEANR_20107

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila persimilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DperRS2

Genomic

  1. NW_020825329.1 Reference DperRS2

    Range
    1033057..1034808
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002027008.2 → XP_002027044.1  UV excision repair protein RAD23 homolog A

    See identical proteins and their annotated locations for XP_002027044.1

    UniProtKB/TrEMBL
    B4H865
    Related
    XP_002027044.1, XM_002027008.2
    Conserved Domains (5) summary
    cd01805
    Location:1 → 75
    RAD23_N; Ubiquitin-like domain of RAD23
    cd14378
    Location:166 → 212
    UBA1_Rhp23p_like; UBA1 domain of Schizosaccharomyces pombe UV excision repair protein Rhp23p and its homologs
    cd14427
    Location:387 → 427
    UBA2_HR23A; UBA2 domain of UV excision repair protein RAD23 homolog A (HR23A) found in vertebrates
    TIGR00601
    Location:1 → 429
    rad23; UV excision repair protein Rad23
    pfam09280
    Location:254 → 308
    XPC-binding; XPC-binding domain
Nucleotide Protein
Heading Accession and Version

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