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ari-2 E3 ubiquitin-protein ligase ari-2 [ Tribolium castaneum (red flour beetle) ]

Gene ID: 660009, updated on 24-May-2024

Summary

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Gene symbol
ari-2
Gene description
E3 ubiquitin-protein ligase ari-2
Locus tag
TcasGA2_TC001697
Gene type
protein coding
RefSeq status
MODEL
Organism
Tribolium castaneum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
Orthologs
fruit fly all
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Genomic context

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See ari-2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 10 NC_087403.1 (8302497..8307756)
103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LGX NC_007416.3 (7745737..7750982)

Chromosome 10 - NC_087403.1Genomic Context describing neighboring genes Neighboring gene Nuclear factor I Neighboring gene uncharacterized LOC135267215 Neighboring gene seven in absentia Neighboring gene lysosomal Pro-X carboxypeptidase Neighboring gene major facilitator superfamily domain-containing protein rtet Neighboring gene pleckstrin homology domain-containing family J member 1 Neighboring gene trans-2,3-enoyl-CoA reductase Sc2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
  2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin conjugating enzyme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
potential E3 ubiquitin-protein ligase ariadne-2
Names
AUGUSTUS-3.0.2_01697
GLEAN_01697
Protein ariadne-2-like Protein
ariadne 2
protein ariadne-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icTriCast1.1 Primary Assembly

Genomic

  1. NC_087403.1 Reference icTriCast1.1 Primary Assembly

    Range
    8302497..8307756
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_966273.5 → XP_971366.1  potential E3 ubiquitin-protein ligase ariadne-2

    See identical proteins and their annotated locations for XP_971366.1

    UniProtKB/TrEMBL
    D6W8E8
    Conserved Domains (2) summary
    smart00647
    Location:202 → 264
    IBR; In Between Ring fingers
    pfam01485
    Location:292 → 324
    IBR; IBR domain, a half RING-finger domain
Nucleotide Protein Strain
Heading Accession and Version

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