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TyrRS Tyrosyl-tRNA synthetase [ Tribolium castaneum (red flour beetle) ]

Gene ID: 659786, updated on 6-Jun-2024

Summary

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Gene symbol
TyrRS
Gene description
Tyrosyl-tRNA synthetase
Locus tag
TcasGA2_TC013181
Gene type
protein coding
RefSeq status
MODEL
Organism
Tribolium castaneum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
Orthologs
fruit fly all
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Genomic context

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See TyrRS in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 5 NC_087398.1 (3140898..3157442)
103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG5 NC_007420.3 (12650645..12668969, complement)

Chromosome 5 - NC_087398.1Genomic Context describing neighboring genes Neighboring gene histone H4 transcription factor Neighboring gene ADP-ribosylation factor-like 5 Neighboring gene DNA polymerase zeta subunit 2 Neighboring gene hyaluronan synthase-like protein kkv Neighboring gene WD repeat domain 59 Neighboring gene NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 homolog sicily Neighboring gene MIF4G domain-containing protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
  2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tyrosine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tyrosyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine--tRNA ligase, cytoplasmic
Names
GLEAN_13181

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icTriCast1.1 Primary Assembly

Genomic

  1. NC_087398.1 Reference icTriCast1.1 Primary Assembly

    Range
    3140898..3157442
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015980258.2 → XP_015835744.2  tyrosine--tRNA ligase, cytoplasmic

    UniProtKB/TrEMBL
    D6WN21

  2. XM_015980257.2 → XP_015835743.2  tyrosine--tRNA ligase, cytoplasmic

    UniProtKB/TrEMBL
    D6WN21

  3. XM_015980256.2 → XP_015835742.2  tyrosine--tRNA ligase, cytoplasmic

    UniProtKB/TrEMBL
    D6WN21
Nucleotide Protein Strain
Heading Accession and Version

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