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LOC6595316 prolyl 4-hydroxylase subunit alpha-2 [ Drosophila persimilis ]

Gene ID: 6595316, updated on 21-Dec-2023

Summary

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Gene symbol
LOC6595316
Gene description
prolyl 4-hydroxylase subunit alpha-2
Locus tag
Dper_GL13510
See related
EnsemblRapid:LOC6595316
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila persimilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GL13510; GL13510-PA
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Genomic context

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See LOC6595316 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current DperRS2 (GCF_003286085.1) Unplaced Scaffold NW_020825288.1 (1103704..1106336)

NW_020825288.1Genomic Context describing neighboring genes Neighboring gene prolyl 4-hydroxylase subunit alpha-2 Neighboring gene prolyl 4-hydroxylase subunit alpha-1 Neighboring gene prolyl 4-hydroxylase subunit alpha-2 Neighboring gene prolyl 4-hydroxylase subunit alpha-2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825288 Unplaced Scaffold Reference DperRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 4-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 4-hydroxylase subunit alpha-2
Names
Dper\GL13510
Dper\GL13510-PA
dper_GLEANR_13976

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila persimilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DperRS2

Genomic

  1. NW_020825288.1 Reference DperRS2

    Range
    1103704..1106336
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002020407.2 → XP_002020443.2  prolyl 4-hydroxylase subunit alpha-2

    UniProtKB/TrEMBL
    B4GNC9
    Related
    XP_002020443.2, XM_002020407.2
    Conserved Domains (2) summary
    smart00702
    Location:333 → 509
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    pfam08336
    Location:36 → 165
    P4Ha_N; Prolyl 4-Hydroxylase alpha-subunit, N-terminal region
Nucleotide Protein
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