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Bin1 histone deacetylase complex subunit SAP18 [ Drosophila persimilis ]

Gene ID: 6594169, updated on 16-May-2024

Summary

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Gene symbol
Bin1
Gene description
histone deacetylase complex subunit SAP18
Locus tag
Dper_GL12401
See related
EnsemblRapid:LOC6594169
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila persimilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GL12401; GL12401-PA
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current DperRS2 (GCF_003286085.1) Unplaced Scaffold NW_020825288.1 (27252667..27253381)

NW_020825288.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6594132 Neighboring gene organic cation transporter protein Neighboring gene RRM_RCAN_like domain containing protein Sra Neighboring gene mediator of RNA polymerase II transcription subunit 15 Neighboring gene organic cation transporter protein Neighboring gene organic cation transporter protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825288 Unplaced Scaffold Reference DperRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone deacetylase complex subunit SAP18
Names
Dper\GL12401
Dper\GL12401-PA
dper_GLEANR_12561

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila persimilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DperRS2

Genomic

  1. NW_020825288.1 Reference DperRS2

    Range
    27252667..27253381
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002019403.2 → XP_002019439.1  histone deacetylase complex subunit SAP18

    See identical proteins and their annotated locations for XP_002019439.1

    UniProtKB/TrEMBL
    B4GMJ9
    Related
    XP_002019439.1, XM_002019403.2
    Conserved Domains (1) summary
    pfam06487
    Location:17 → 134
    SAP18; Sin3 associated polypeptide p18 (SAP18)
Nucleotide Protein
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