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LOC6587489 cullin-5 [ Drosophila persimilis ]

Gene ID: 6587489, updated on 10-May-2024

Summary

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Gene symbol
LOC6587489
Gene description
cullin-5
Locus tag
Dper_GL23281
See related
EnsemblRapid:LOC6587489
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila persimilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GL23281; GL23281-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6587489 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current DperRS2 (GCF_003286085.1) Unplaced Scaffold NW_020825288.1 (13997080..14000988, complement)

NW_020825288.1Genomic Context describing neighboring genes Neighboring gene NAD-dependent protein deacetylase Sirt7 Neighboring gene attacin-A Neighboring gene tyrosine-protein phosphatase vhp-1 Neighboring gene ATP-dependent RNA helicase dbp2 Neighboring gene pre-mRNA-splicing factor ISY1 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825288 Unplaced Scaffold Reference DperRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul5-RING ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cullin-5
Names
Dper\GL23281
Dper\GL23281-PA
dper_GLEANR_5625

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila persimilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DperRS2

Genomic

  1. NW_020825288.1 Reference DperRS2

    Range
    13997080..14000988 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002013621.2 → XP_002013657.1  cullin-5

    See identical proteins and their annotated locations for XP_002013657.1

    UniProtKB/TrEMBL
    B4G4X7
    Related
    XP_002013657.1, XM_002013621.2
    Conserved Domains (3) summary
    smart00182
    Location:514 → 649
    CULLIN; Cullin
    smart00884
    Location:773 → 840
    Cullin_Nedd8; Cullin protein neddylation domain
    pfam00888
    Location:33 → 737
    Cullin; Cullin family
Nucleotide Protein
Heading Accession and Version

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