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LOC658358 angio-associated migratory cell protein [ Tribolium castaneum (red flour beetle) ]

Gene ID: 658358, updated on 10-May-2024

Summary

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Gene symbol
LOC658358
Gene description
angio-associated migratory cell protein
Locus tag
TcasGA2_TC013192
Gene type
protein coding
RefSeq status
MODEL
Organism
Tribolium castaneum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
Orthologs
fruit fly all
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Genomic context

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See LOC658358 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 5 NC_087398.1 (3262119..3263623)
103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG5 NC_007420.3 (12545762..12547238, complement)

Chromosome 5 - NC_087398.1Genomic Context describing neighboring genes Neighboring gene dnaJ homolog subfamily B member 13 Neighboring gene uncharacterized LOC658430 Neighboring gene uncharacterized LOC135266371 Neighboring gene juvenile hormone esterase Neighboring gene Monocarboxylate transporter 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
  2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
angio-associated migratory cell protein
Names
GLEAN_13192

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icTriCast1.1 Primary Assembly

Genomic

  1. NC_087398.1 Reference icTriCast1.1 Primary Assembly

    Range
    3262119..3263623
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_964755.4 → XP_969848.1  angio-associated migratory cell protein

    See identical proteins and their annotated locations for XP_969848.1

    UniProtKB/TrEMBL
    D6WN00
    Conserved Domains (3) summary
    cd00200
    Location:38 → 361
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam13360
    Location:110 → 324
    PQQ_2; PQQ-like domain
    sd00039
    Location:49 → 86
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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