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mRpL12 mitochondrial ribosomal protein L12 [ Tribolium castaneum (red flour beetle) ]

Gene ID: 657824, updated on 10-May-2024

Summary

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Gene symbol
mRpL12
Gene description
mitochondrial ribosomal protein L12
Locus tag
TcasGA2_TC005486
Gene type
protein coding
RefSeq status
MODEL
Organism
Tribolium castaneum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
Orthologs
fruit fly all
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Genomic context

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See mRpL12 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 6 NC_087399.1 (2561383..2562107)
103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG8 NC_007423.3 (12209568..12210280, complement)

Chromosome 6 - NC_087399.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103314084 Neighboring gene dynein heavy chain 3, axonemal Neighboring gene sodium-independent sulfate anion transporter Neighboring gene sodium-independent sulfate anion transporter Neighboring gene uncharacterized LOC107398548 Neighboring gene sodium-independent sulfate anion transporter

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
  2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein mRpL12
Names
39S ribosomal protein L12, mitochondrial
39S ribosomal protein L12, mitochondrial-like Protein
AUGUSTUS-3.0.2_05486
GLEAN_05486

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icTriCast1.1 Primary Assembly

Genomic

  1. NC_087399.1 Reference icTriCast1.1 Primary Assembly

    Range
    2561383..2562107
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_964259.5 → XP_969352.1  uncharacterized protein mRpL12

    See identical proteins and their annotated locations for XP_969352.1

    UniProtKB/TrEMBL
    D6WY14
    Conserved Domains (2) summary
    cd00387
    Location:51 → 179
    Ribosomal_L7_L12; Ribosomal protein L7/L12. Ribosomal protein L7/L12 refers to the large ribosomal subunit proteins L7 and L12, which are identical except that L7 is acetylated at the N terminus. It is a component of the L7/L12 stalk, which is located at the surface of ...
    COG0222
    Location:50 → 179
    RplL; Ribosomal protein L7/L12 [Translation, ribosomal structure and biogenesis]
Nucleotide Protein Strain
Heading Accession and Version

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