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puf ubiquitinyl hydrolase 1 puf [ Drosophila mojavensis ]

Gene ID: 6572408, updated on 23-May-2024

Summary

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Gene symbol
puf
Gene description
ubiquitinyl hydrolase 1 puf
Locus tag
Dmoj_GI23592
See related
EnsemblRapid:LOC6572408
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila mojavensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
Also known as
GI23592; GI23592-PB
Orthologs
fruit fly all
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Genomic context

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See puf in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
102 current ASM1815372v1 (GCF_018153725.1) Unplaced Scaffold NW_025318726.1 (1868289..1883419)
101 previous assembly dmoj_caf1 (GCF_000005175.2) Unplaced Scaffold NW_001979112.1 (4750640..4765785, complement)

NW_025318726.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6572411 Neighboring gene set1/Ash2 histone methyltransferase complex subunit ASH2 Neighboring gene metallothionein-3 Neighboring gene atlastin Neighboring gene tyrosine-protein kinase Wsck

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase puf
Names
Dmoj\GI23592
Dmoj\GI23592-PB
dmoj_GLEANR_8720

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila mojavensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815372v1

Genomic

  1. NW_025318726.1 Reference ASM1815372v1

    Range
    1868289..1883419
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001998481.4 → XP_001998517.3  ubiquitin carboxyl-terminal hydrolase puf

    UniProtKB/TrEMBL
    B4K507
    Related
    XP_001998517.3, XM_001998481.4
    Conserved Domains (2) summary
    cd02659
    Location:2029 → 2397
    peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam12030
    Location:2637 → 2873
    DUF3517; Domain of unknown function (DUF3517)
Nucleotide Protein
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