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LOC6569658 prolyl 4-hydroxylase subunit alpha-2 [ Drosophila grimshawi ]

Gene ID: 6569658, updated on 7-Dec-2023

Summary

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Gene symbol
LOC6569658
Gene description
prolyl 4-hydroxylase subunit alpha-2
Locus tag
Dgri_GH14207
See related
EnsemblRapid:LOC6569658
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH14207; GH23597; GH14207-PA; GH23597-PA
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Genomic context

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See LOC6569658 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025063098.1 (29870511..29873680, complement)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961683.1 (1116385..1118936)

NW_025063098.1Genomic Context describing neighboring genes Neighboring gene kelch-like protein 5 Neighboring gene kelch-like protein 5 Neighboring gene uncharacterized LOC116805998 Neighboring gene uncharacterized LOC116805988

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 4-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 4-hydroxylase subunit alpha-2
Names
Dgri\GH14207
Dgri\GH14207-PA
Dgri\GH23597
Dgri\GH23597-PA
dgri_GLEANR_14100
dgri_GLEANR_8082

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025063098.1 Reference ASM1815329v1

    Range
    29870511..29873680 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043215137.1 → XP_043071072.1  prolyl 4-hydroxylase subunit alpha-2

    UniProtKB/TrEMBL
    B4JY05
    Related
    XP_043071072.1, XM_043215137.1
Nucleotide Protein
Heading Accession and Version

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