U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC6568391 autophagy-related protein 13 homolog [ Drosophila grimshawi ]

Gene ID: 6568391, updated on 10-May-2024

Summary

Go to the top of the page Help
Gene symbol
LOC6568391
Gene description
autophagy-related protein 13 homolog
Locus tag
Dgri_GH14376
See related
EnsemblRapid:LOC6568391
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH14376; GH14376-PA
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC6568391 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025063098.1 (22853676..22856696)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961680.1 (3954600..3957620, complement)

NW_025063098.1Genomic Context describing neighboring genes Neighboring gene dipeptidyl peptidase 3 Neighboring gene meiosis-specific nuclear structural protein 1 Neighboring gene adult enhancer factor 1 Neighboring gene LIM zinc finger domain containing stck

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in piecemeal microautophagy of the nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Atg1/ULK1 kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extrinsic component of membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
autophagy-related protein 13 homolog
Names
Dgri\GH14376
Dgri\GH14376-PA
dgri_GLEANR_1426

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025063098.1 Reference ASM1815329v1

    Range
    22853676..22856696
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032740616.1 → XP_032596507.1  autophagy-related protein 13 homolog

    UniProtKB/TrEMBL
    B4JV55
    Related
    XP_032596507.1, XM_032740616.1
    Conserved Domains (1) summary
    pfam10033
    Location:22 → 223
    ATG13; Autophagy-related protein 13
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials