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Prosalpha6 Proteasome alpha6 subunit [ Drosophila grimshawi ]

Gene ID: 6567047, updated on 22-May-2024

Summary

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Gene symbol
Prosalpha6
Gene description
Proteasome alpha6 subunit
Locus tag
Dgri_GH13363
See related
EnsemblRapid:LOC6567047
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH13363; GH13363-PA
Orthologs
fruit fly all
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Genomic context

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See Prosalpha6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025062900.1 (19784754..19785865, complement)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961678.1 (1666636..1667751, complement)

NW_025062900.1Genomic Context describing neighboring genes Neighboring gene dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 Neighboring gene elongation factor 1-delta Neighboring gene Cdk5 activator-like protein Neighboring gene probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex, alpha-subunit complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proteasome subunit alpha type-1
Names
Dgri\GH13363
Dgri\GH13363-PA
dgri_GLEANR_13288

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025062900.1 Reference ASM1815329v1

    Range
    19784754..19785865 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001992907.3 → XP_001992943.1  proteasome subunit alpha type-1

    See identical proteins and their annotated locations for XP_001992943.1

    UniProtKB/TrEMBL
    B4JPN8
    Related
    XP_001992943.1, XM_001992907.3
    Conserved Domains (2) summary
    COG0638
    Location:4 → 239
    PRE1; 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones]
    cd03749
    Location:6 → 221
    proteasome_alpha_type_1; proteasome_alpha_type_1. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on ...
Nucleotide Protein
Heading Accession and Version

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