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CSN7 COP9 signalosome subunit 7 [ Tribolium castaneum (red flour beetle) ]

Gene ID: 656634, updated on 10-May-2024

Summary

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Gene symbol
CSN7
Gene description
COP9 signalosome subunit 7
Locus tag
TcasGA2_TC004326
Gene type
protein coding
RefSeq status
MODEL
Organism
Tribolium castaneum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
Orthologs
fruit fly all
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Genomic context

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See CSN7 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 2 NC_087395.1 (499031..502320)
103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG9 NC_007424.3 (712185..715472, complement)

Chromosome 2 - NC_087395.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107398582 Neighboring gene uncharacterized LOC135265351 Neighboring gene uncharacterized LOC135265350 Neighboring gene IQ domain-containing protein E-like Neighboring gene metabotropic glutamate receptor 2 Neighboring gene gastric triacylglycerol lipase-like Neighboring gene uncharacterized LOC135265361

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
  2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in COP9 signalosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COP9 signalosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
COP9 signalosome complex subunit 7b
Names
AUGUSTUS-3.0.2_04326
COP9 signalosome complex subunit 7-like Protein
GLEAN_04326

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icTriCast1.1 Primary Assembly

Genomic

  1. NC_087395.1 Reference icTriCast1.1 Primary Assembly

    Range
    499031..502320
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008198673.3 → XP_008196895.1  COP9 signalosome complex subunit 7b isoform X2

    UniProtKB/TrEMBL
    A0A139WCF9
    Conserved Domains (1) summary
    smart00753
    Location:89 → 178
    PAM; PCI/PINT associated module

  2. XM_963149.4 → XP_968242.1  COP9 signalosome complex subunit 7b isoform X1

    See identical proteins and their annotated locations for XP_968242.1

    Conserved Domains (1) summary
    smart00753
    Location:89 → 178
    PAM; PCI/PINT associated module
Nucleotide Protein Strain
Heading Accession and Version

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