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RpL18A ribosomal protein L18A [ Drosophila grimshawi ]

Gene ID: 6560035, updated on 23-May-2024

Summary

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Gene symbol
RpL18A
Gene description
ribosomal protein L18A
Locus tag
Dgri_GH20961
See related
EnsemblRapid:LOC6560035
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH20961; GH20961-PA
Orthologs
fruit fly all
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Genomic context

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See RpL18A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025062889.1 (4447874..4448971)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961673.1 (434416..435513)

NW_025062889.1Genomic Context describing neighboring genes Neighboring gene misexpression suppressor of ras 4 Neighboring gene transcription initiation factor TFIID subunit 11-like Neighboring gene death-associated inhibitor of apoptosis 2 Neighboring gene EEF1A lysine methyltransferase 2 Neighboring gene sodium-dependent transporter bedraggled

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L18a
Names
Dgri\GH20961
Dgri\GH20961-PA
dgri_GLEANR_5167

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025062889.1 Reference ASM1815329v1

    Range
    4447874..4448971
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001985697.2 → XP_001985733.1  60S ribosomal protein L18a isoform X1

    See identical proteins and their annotated locations for XP_001985733.1

    UniProtKB/TrEMBL
    B4J4Q4
    Related
    XP_001985733.1, XM_001985697.2
    Conserved Domains (1) summary
    pfam01775
    Location:85 → 130
    Ribosomal_L18ae; Ribosomal L18ae/LX protein domain

  2. XM_032735323.1 → XP_032591214.1  60S ribosomal protein L18a isoform X2

    Related
    XP_032591214.1, XM_032735323.1
    Conserved Domains (1) summary
    pfam01775
    Location:80 → 127
    Ribosomal_L18A; Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
Nucleotide Protein
Heading Accession and Version

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