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LOC6557827 short/branched chain specific acyl-CoA dehydrogenase, mitochondrial [ Drosophila grimshawi ]

Gene ID: 6557827, updated on 10-May-2024

Summary

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Gene symbol
LOC6557827
Gene description
short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
Locus tag
Dgri_GH16965
See related
EnsemblRapid:LOC6557827
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH16965; GH16965-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6557827 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025063240.1 (4564074..4568233, complement)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961672.1 (18975725..18979852)

NW_025063240.1Genomic Context describing neighboring genes Neighboring gene long-chain-fatty-acid--CoA ligase 5 Neighboring gene ninjurin-B Neighboring gene gametocyte-specific factor 1 homolog Neighboring gene ribosomal protein L26 Neighboring gene gametocyte-specific factor 1 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
Names
Dgri\GH16965
Dgri\GH16965-PA
dgri_GLEANR_16612

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025063240.1 Reference ASM1815329v1

    Range
    4564074..4568233 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001985227.3 → XP_001985263.1  short/branched chain specific acyl-CoA dehydrogenase, mitochondrial

    See identical proteins and their annotated locations for XP_001985263.1

    UniProtKB/TrEMBL
    B4IYD8
    Related
    XP_001985263.1, XM_001985227.3
    Conserved Domains (2) summary
    cd01158
    Location:39 → 410
    SCAD_SBCAD; Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases
    COG1960
    Location:37 → 406
    CaiA; Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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