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AP-1sigma AP-1 complex subunit sigma-2 [ Drosophila erecta ]

Gene ID: 6555077, updated on 24-May-2024

Summary

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Gene symbol
AP-1sigma
Gene description
AP-1 complex subunit sigma-2
Locus tag
Dere_GG11239
See related
EnsemblRapid:LOC6555077
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila erecta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GG11239; GG11239-PA; GG11239-PB; GG11239-PC; GG11239-PD
Orthologs
fruit fly all
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Genomic context

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See AP-1sigma in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825194.1 (8485622..8489599, complement)

NW_020825194.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein CG5902 Neighboring gene transmembrane protein 179 Neighboring gene diacylglycerol kinase theta Neighboring gene bifunctional glutamate/proline--tRNA ligase Neighboring gene putative fatty acyl-CoA reductase CG5065

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825194 Unplaced Scaffold Reference DereRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AP-1 adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of membrane coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-1 complex subunit sigma-2
Names
Dere\GG11239
Dere\GG11239-PA
Dere\GG11239-PB
Dere\GG11239-PC
Dere\GG11239-PD
dere_GLEANR_11355

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DereRS2

Genomic

  1. NW_020825194.1 Reference DereRS2

    Range
    8485622..8489599 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001982032.3 → XP_001982068.2  AP-1 complex subunit sigma-2 isoform X1

    UniProtKB/TrEMBL
    B3P8B4
    Related
    XP_001982068.2, XM_001982032.3
    Conserved Domains (1) summary
    cd14831
    Location:4 → 145
    AP1_sigma; AP-1 complex subunit sigma

  2. XM_015153396.2 → XP_015008882.1  AP-1 complex subunit sigma-2 isoform X2

    Related
    XP_015008882.1, XM_015153396.2
    Conserved Domains (1) summary
    cd14831
    Location:4 → 145
    AP1_sigma; AP-1 complex subunit sigma

  3. XM_015153395.2 → XP_015008881.1  AP-1 complex subunit sigma-2 isoform X3

    Related
    XP_015008881.1, XM_015153395.2
    Conserved Domains (1) summary
    cd14831
    Location:4 → 144
    AP1_sigma; AP-1 complex subunit sigma
Nucleotide Protein
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