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LOC655194 AN1-type zinc finger protein 2A [ Tribolium castaneum (red flour beetle) ]

Gene ID: 655194, updated on 10-May-2024

Summary

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Gene symbol
LOC655194
Gene description
AN1-type zinc finger protein 2A
Locus tag
TcasGA2_TC007847
Gene type
protein coding
RefSeq status
MODEL
Organism
Tribolium castaneum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
Orthologs
fruit fly all
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Genomic context

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See LOC655194 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 9 NC_087402.1 (1524599..1525617)
103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG4 NC_007419.2 (1395753..1396836)

Chromosome 9 - NC_087402.1Genomic Context describing neighboring genes Neighboring gene cytochrome b5 Neighboring gene Rab escort protein Neighboring gene phosphoribosylformylglycinamidine synthase Neighboring gene Autophagy-related 12 Neighboring gene sortilin-related receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
  2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein targeting to ER IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AN1-type zinc finger protein 2A
Names
AN1-type zinc finger protein 2B-like Protein
AUGUSTUS-3.0.2_07847
GLEAN_07847

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icTriCast1.1 Primary Assembly

Genomic

  1. NC_087402.1 Reference icTriCast1.1 Primary Assembly

    Range
    1524599..1525617
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_961710.4 → XP_966803.1  AN1-type zinc finger protein 2A

    See identical proteins and their annotated locations for XP_966803.1

    UniProtKB/TrEMBL
    D2A2F5
    Conserved Domains (3) summary
    COG3582
    Location:21 → 162
    COG3582; Predicted nucleic acid binding protein containing the AN1-type Zn-finger [General function prediction only]
    pfam01428
    Location:100 → 136
    zf-AN1; AN1-like Zinc finger
    pfam02809
    Location:170 → 185
    UIM; Ubiquitin interaction motif
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases