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vermilion Tryptophan 2,3-dioxygenase vermilion [ Drosophila erecta ]

Gene ID: 6551492, updated on 23-May-2024

Summary

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Gene symbol
vermilion
Gene description
Tryptophan 2,3-dioxygenase vermilion
Locus tag
Dere_GG18380
See related
EnsemblRapid:LOC6551492
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila erecta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
TO; TDO; TRPO; GG18380; GG18380-PA
Orthologs
fruit fly all
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Genomic context

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See vermilion in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825216.1 (1309157..1310892, complement)

NW_020825216.1Genomic Context describing neighboring genes Neighboring gene unconventional myosin-XV Neighboring gene poly(U)-specific endoribonuclease homolog Neighboring gene uncharacterized LOC6551493 Neighboring gene protein C21orf2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825216 Unplaced Scaffold Reference DereRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tryptophan 2,3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tryptophan catabolic process to acetyl-CoA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tryptophan catabolic process to kynurenine IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tryptophan 2,3-dioxygenase
Names
Dere\GG18380
Dere\GG18380-PA
Protein vermilion
Tryptamin 2,3-dioxygenase
Tryptophan oxygenase
Tryptophan pyrrolase
Tryptophanase
dere_GLEANR_3222

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DereRS2

Genomic

  1. NW_020825216.1 Reference DereRS2

    Range
    1309157..1310892 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001977151.3 → XP_001977187.1  tryptophan 2,3-dioxygenase

    See identical proteins and their annotated locations for XP_001977187.1

    UniProtKB/Swiss-Prot
    B3NVC6
    Related
    XP_001977187.1, XM_001977151.3
    Conserved Domains (1) summary
    pfam03301
    Location:11 → 357
    Trp_dioxygenase; Tryptophan 2,3-dioxygenase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B3NVC6.1 GenPept UniProtKB/Swiss-Prot:B3NVC6

Gene LinkOut

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Molecular Biology Databases
Research Materials