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Vha44 V-type proton ATPase subunit Vha44 [ Drosophila erecta ]

Gene ID: 6548683, updated on 15-May-2024

Summary

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Gene symbol
Vha44
Gene description
V-type proton ATPase subunit Vha44
Locus tag
Dere_GG22273
See related
EnsemblRapid:LOC6548683
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila erecta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GG22273; GG22273-PB
Orthologs
fruit fly all
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Genomic context

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See Vha44 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825207.1 (9159556..9170695, complement)

NW_020825207.1Genomic Context describing neighboring genes Neighboring gene NADPH oxidase 5 Neighboring gene inhibitor of Bruton tyrosine kinase Neighboring gene uncharacterized LOC6548528 Neighboring gene transcription factor grauzone Neighboring gene hydroxymethylglutaryl-CoA synthase 1 Neighboring gene alpha-N-acetylgalactosaminidase Neighboring gene nuclear pore glycoprotein p62

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825207 Unplaced Scaffold Reference DereRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase, V1 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit C
Names
Dere\GG22273
Dere\GG22273-PB
dere_GLEANR_7018

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DereRS2

Genomic

  1. NW_020825207.1 Reference DereRS2

    Range
    9159556..9170695 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026980818.1 → XP_026836619.1  V-type proton ATPase subunit C isoform X3

    Related
    XP_026836619.1, XM_026980818.1
    Conserved Domains (2) summary
    cd14785
    Location:57 → 77
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:6 → 374
    V-ATPase_C; V-ATPase subunit C

  2. XM_026980817.1 → XP_026836618.1  V-type proton ATPase subunit C isoform X2

    UniProtKB/TrEMBL
    B3NPJ9
    Related
    XP_026836618.1, XM_026980817.1
    Conserved Domains (3) summary
    cd14785
    Location:488 → 514
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:465 → 740
    V-ATPase_C; V-ATPase subunit C
    cl15414
    Location:6 → 98
    V-ATPase_C; Subunit C of vacuolar H+-ATPase (V-ATPase)

  3. XM_026980815.1 → XP_026836616.1  V-type proton ATPase subunit C isoform X1

    UniProtKB/TrEMBL
    B3NPJ9
    Related
    XP_026836616.1, XM_026980815.1
    Conserved Domains (3) summary
    cd14785
    Location:509 → 535
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:486 → 761
    V-ATPase_C; V-ATPase subunit C
    cl15414
    Location:6 → 98
    V-ATPase_C; Subunit C of vacuolar H+-ATPase (V-ATPase)

  4. XM_026980816.1 → XP_026836617.1  V-type proton ATPase subunit C isoform X1

    UniProtKB/TrEMBL
    B3NPJ9
    Related
    XP_026836617.1, XM_026980816.1
    Conserved Domains (3) summary
    cd14785
    Location:509 → 535
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:486 → 761
    V-ATPase_C; V-ATPase subunit C
    cl15414
    Location:6 → 98
    V-ATPase_C; Subunit C of vacuolar H+-ATPase (V-ATPase)

  5. XM_026980819.1 → XP_026836620.1  V-type proton ATPase subunit C isoform X3

    Related
    XP_026836620.1, XM_026980819.1
    Conserved Domains (2) summary
    cd14785
    Location:57 → 77
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:6 → 374
    V-ATPase_C; V-ATPase subunit C
Nucleotide Protein
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