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AspRS-m aspartyl-tRNA synthetase, mitochondrial [ Drosophila erecta ]

Gene ID: 6547633, updated on 23-May-2024

Summary

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Gene symbol
AspRS-m
Gene description
aspartyl-tRNA synthetase, mitochondrial
Locus tag
Dere_GG22777
See related
EnsemblRapid:LOC6547633
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila erecta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GG22777; GG22777-PB
Orthologs
fruit fly all
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Genomic context

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See AspRS-m in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825207.1 (2795810..2800810, complement)

NW_020825207.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6547474 Neighboring gene phospholipase A1 member A Neighboring gene diacylglycerol O-acyltransferase 1 Neighboring gene chromosome segregation 1 Neighboring gene trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Neighboring gene mucin-2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825207 Unplaced Scaffold Reference DereRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aspartate-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in aspartyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartate--tRNA ligase, mitochondrial
Names
Dere\GG22777
Dere\GG22777-PB
dere_GLEANR_7476

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DereRS2

Genomic

  1. NW_020825207.1 Reference DereRS2

    Range
    2795810..2800810 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001976232.3 → XP_001976268.2  aspartate--tRNA ligase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    B3NNL7
    Related
    XP_001976268.2, XM_001976232.3
    Conserved Domains (4) summary
    PRK00476
    Location:407 → 990
    aspS; aspartyl-tRNA synthetase; Validated
    cd00777
    Location:544 → 962
    AspRS_core; Asp tRNA synthetase (aspRS) class II core domain. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. AspRS is a homodimer, which attaches a specific amino acid to the 3' OH group of ribose of the ...
    cd04317
    Location:407 → 540
    EcAspRS_like_N; EcAspRS_like_N: N-terminal, anticodon recognition domain of the type found in Escherichia coli aspartyl-tRNA synthetase (AspRS), the human mitochondrial (mt) AspRS-2, the discriminating (D) Thermus thermophilus AspRS-1, and the nondiscriminating (ND) ...
    cl09930
    Location:236 → 336
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

  2. XM_026980506.1 → XP_026836307.1  aspartate--tRNA ligase, mitochondrial isoform X1

    Related
    XP_026836307.1, XM_026980506.1
    Conserved Domains (3) summary
    cl25375
    Location:293 → 393
    Asp_Lys_Asn_RS_N; N-terminal, anticodon recognition domain of class 2b aminoacyl-tRNA synthetases (aaRSs). This domain is a beta-barrel domain (OB fold) involved in binding the tRNA anticodon stem-loop. Class 2b aaRSs include the homodimeric aspartyl-, asparaginyl-, and ...
    cl27124
    Location:1039 → 1145
    IsdB; heme uptake protein IsdB
    cl27743
    Location:464 → 1047
    tRNA-synt_2; tRNA synthetases class II (D, K and N)
Nucleotide Protein
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