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TfIIS RNA polymerase II elongation factor [ Drosophila erecta ]

Gene ID: 6542602, updated on 16-May-2024

Summary

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Gene symbol
TfIIS
Gene description
RNA polymerase II elongation factor
Locus tag
Dere_GG24225
See related
EnsemblRapid:LOC6542602
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila erecta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GG24225; GG24225-PA
Orthologs
fruit fly all
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Genomic context

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See TfIIS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825200.1 (7008238..7009734, complement)

NW_020825200.1Genomic Context describing neighboring genes Neighboring gene myosin-VIIa Neighboring gene uncharacterized LOC6541982 Neighboring gene ATP-dependent RNA helicase vasa Neighboring gene vasa intronic gene Neighboring gene anoctamin-8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825200 Unplaced Scaffold Reference DereRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription elongation factor S-II
Names
Dere\GG24225
Dere\GG24225-PA
dere_GLEANR_8973

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DereRS2

Genomic

  1. NW_020825200.1 Reference DereRS2

    Range
    7008238..7009734 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001968901.3 → XP_001968937.1  transcription elongation factor S-II

    See identical proteins and their annotated locations for XP_001968937.1

    UniProtKB/TrEMBL
    B3N5N7
    Related
    XP_001968937.1, XM_001968901.3
    Conserved Domains (4) summary
    smart00509
    Location:7 → 82
    TFS2N; Domain in the N-terminus of transcription elongation factor S-II (and elsewhere)
    cd13749
    Location:266 → 312
    Zn-ribbon_TFIIS; domain III/zinc ribbon domain of Transcription Factor IIS
    TIGR01385
    Location:5 → 313
    TFSII; transcription elongation factor S-II
    pfam07500
    Location:151 → 257
    TFIIS_M; Transcription factor S-II (TFIIS), central domain
Nucleotide Protein
Heading Accession and Version

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