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LOC6537462 cathepsin D [ Drosophila yakuba ]

Gene ID: 6537462, updated on 10-May-2024

Summary

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Gene symbol
LOC6537462
Gene description
cathepsin D
Locus tag
Dyak_GE10128
See related
EnsemblRapid:LOC6537462
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila yakuba
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GE10128; GE10128-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6537462 in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
1
Annotation release Status Assembly Chr Location
102 current Prin_Dyak_Tai18E2_2.1 (GCF_016746365.2) 3R NC_052530.2 (19119476..19120791)
101 previous assembly Prin_Dyak_Tai18E2_2.0 (GCF_016746365.1) 3R NC_052530.1 (19119526..19120839)

Chromosome 3R - NC_052530.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122319619 Neighboring gene uncharacterized LOC26536096 Neighboring gene lysosomal aspartic protease Neighboring gene lysosomal aspartic protease Neighboring gene uncharacterized LOC6537464

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aspartic-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell death IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cathepsin D
Names
Dyak\GE10128
Dyak\GE10128-PA
dyak_GLEANR_10081

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila yakuba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

Genomic

  1. NC_052530.2 Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

    Range
    19119476..19120791
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002097982.4 → XP_002098018.2  cathepsin D

    UniProtKB/TrEMBL
    B4PU80
    Related
    XP_002098018.2, XM_002097982.4
    Conserved Domains (2) summary
    pfam00026
    Location:61 → 367
    Asp; Eukaryotic aspartyl protease
    cl11403
    Location:59 → 366
    pepsin_retropepsin_like; Cellular and retroviral pepsin-like aspartate proteases
Nucleotide Protein Strain
Heading Accession and Version

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