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SelR methionine sulfoxide reductase SelR [ Drosophila yakuba ]

Gene ID: 6536567, updated on 23-May-2024

Summary

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Gene symbol
SelR
Gene description
methionine sulfoxide reductase SelR
Locus tag
Dyak_GE24659
See related
EnsemblRapid:LOC6536567
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila yakuba
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GE24659; GE24659-PB; GE24659-PC; GE24659-PD; GE24659-PE; GE24659-PF
Orthologs
fruit fly all
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Genomic context

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See SelR in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Prin_Dyak_Tai18E2_2.1 (GCF_016746365.2) 3R NC_052530.2 (12496067..12501615, complement)
101 previous assembly Prin_Dyak_Tai18E2_2.0 (GCF_016746365.1) 3R NC_052530.1 (12496114..12501662, complement)

Chromosome 3R - NC_052530.2Genomic Context describing neighboring genes Neighboring gene thiamine transporter 1 Neighboring gene thiamine transporter 1 Neighboring gene tetraspanin-33 Neighboring gene alcohol dehydrogenase class-3 Fdh

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Landscape of standing variation for tandem duplications in Drosophila yakuba and Drosophila simulans. Rogers RL, et al. Mol Biol Evol, 2014 Jul. PMID 24710518, Free PMC Article
  2. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-methionine (R)-S-oxide reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methionine-R-sulfoxide reductase B1
Names
Dyak\GE24659
Dyak\GE24659-PB
Dyak\GE24659-PC
Dyak\GE24659-PD
Dyak\GE24659-PE
Dyak\GE24659-PF
dyak_GLEANR_8334

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila yakuba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

Genomic

  1. NC_052530.2 Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

    Range
    12496067..12501615 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015192350.2 → XP_015047836.1  methionine-R-sulfoxide reductase B1 isoform X6

    UniProtKB/TrEMBL
    A0A0R1E2A4, A0A0R1E5E4
    Related
    XP_015047836.1, XM_015192350.2
    Conserved Domains (1) summary
    pfam01641
    Location:14 → 144
    SelR; SelR domain

  2. XM_002097107.3 → XP_002097143.2  methionine-R-sulfoxide reductase B1 isoform X1

    UniProtKB/TrEMBL
    B4PLE8
    Related
    XP_002097143.2, XM_002097107.3
    Conserved Domains (1) summary
    pfam01641
    Location:58 → 188
    SelR; SelR domain

  3. XM_015192351.2 → XP_015047837.1  methionine-R-sulfoxide reductase B1 isoform X4

    UniProtKB/TrEMBL
    A0A0R1E6C3
    Related
    XP_015047837.1, XM_015192351.2
    Conserved Domains (1) summary
    pfam01641
    Location:58 → 177
    SelR; SelR domain

  4. XM_039375761.2 → XP_039231695.1  methionine-R-sulfoxide reductase B1 isoform X3

    Related
    XP_039231695.1, XM_039375761.2
    Conserved Domains (1) summary
    PRK00222
    Location:50 → 184
    PRK00222; peptide-methionine (R)-S-oxide reductase MsrB

  5. XM_039375760.2 → XP_039231694.1  methionine-R-sulfoxide reductase B1 isoform X2

    Related
    XP_039231694.1, XM_039375760.2
    Conserved Domains (1) summary
    PRK00222
    Location:50 → 185
    PRK00222; peptide-methionine (R)-S-oxide reductase MsrB

  6. XM_015192352.3 → XP_015047838.1  methionine-R-sulfoxide reductase B1 isoform X5

    UniProtKB/TrEMBL
    A0A0R1E6S9
    Related
    XP_015047838.1, XM_015192352.3
    Conserved Domains (1) summary
    PRK00222
    Location:50 → 178
    PRK00222; peptide-methionine (R)-S-oxide reductase MsrB
Nucleotide Protein Strain
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