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LOC6535401 ubiquitin domain-containing protein 1 [ Drosophila yakuba ]

Gene ID: 6535401, updated on 10-May-2024

Summary

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Gene symbol
LOC6535401
Gene description
ubiquitin domain-containing protein 1
Locus tag
Dyak_GE25467
See related
EnsemblRapid:LOC6535401
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila yakuba
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GE25467; GE25467-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6535401 in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Prin_Dyak_Tai18E2_2.1 (GCF_016746365.2) 3R NC_052530.2 (3685687..3688599)
101 previous assembly Prin_Dyak_Tai18E2_2.0 (GCF_016746365.1) 3R NC_052530.1 (3685753..3688970)

Chromosome 3R - NC_052530.2Genomic Context describing neighboring genes Neighboring gene hyaluronan synthase-like protein kkv Neighboring gene uncharacterized LOC6535399 Neighboring gene transfer RNA arginine (anticodon UCG) Neighboring gene Odorant receptor 83a Neighboring gene alpha-tocopherol transfer protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin domain-containing protein 1
Names
Dyak\GE25467
Dyak\GE25467-PA
dyak_GLEANR_9095

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila yakuba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

Genomic

  1. NC_052530.2 Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

    Range
    3685687..3688599
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002096014.4 → XP_002096050.1  ubiquitin domain-containing protein 1

    See identical proteins and their annotated locations for XP_002096050.1

    UniProtKB/TrEMBL
    B4PV93
    Related
    XP_002096050.1, XM_002096014.4
    Conserved Domains (3) summary
    cd01794
    Location:164 → 233
    DC_UbP_C; dendritic cell derived ubiquitin-like protein
    smart00213
    Location:161 → 232
    UBQ; Ubiquitin homologues
    pfam16455
    Location:37 → 141
    UBD; Ubiquitin-binding domain
Nucleotide Protein Strain
Heading Accession and Version

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Research Materials