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RpS12 ribosomal protein S12 [ Drosophila yakuba ]

Gene ID: 6533963, updated on 23-May-2024

Summary

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Gene symbol
RpS12
Gene description
ribosomal protein S12
Locus tag
Dyak_GE21945
See related
EnsemblRapid:LOC6533963
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila yakuba
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GE21945; RpS12-PA; Dyak\RpS12; GE21945-PA
Orthologs
fruit fly all
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Genomic context

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See RpS12 in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Prin_Dyak_Tai18E2_2.1 (GCF_016746365.2) 3L NC_052529.2 (13196141..13197562)
101 previous assembly Prin_Dyak_Tai18E2_2.0 (GCF_016746365.1) 3L NC_052529.1 (13196150..13197574)

Chromosome 3L - NC_052529.2Genomic Context describing neighboring genes Neighboring gene isoprenylcysteine carboxylmethyltransferase ste14 Neighboring gene Adenosine kinase 2 Neighboring gene small nucleolar RNA U18 Neighboring gene small nucleolar RNA U18 Neighboring gene zinc finger MYND-type containing 10 Neighboring gene uncharacterized LOC6533967 Neighboring gene Serine-arginine repetitive matrix 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An evolutionary analysis of orphan genes in Drosophila. Domazet-Loso T, et al. Genome Res, 2003 Oct. PMID 14525923, Free PMC Article
  2. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein S12
Names
Dyak\GE21945
Dyak\GE21945-PA
Dyak\RpS12-PA
dyak_GLEANR_5664

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila yakuba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

Genomic

  1. NC_052529.2 Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

    Range
    13196141..13197562
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002094627.4 → XP_002094663.1  40S ribosomal protein S12

    See identical proteins and their annotated locations for XP_002094663.1

    UniProtKB/TrEMBL
    Q6XI36
    Related
    XP_002094663.1, XM_002094627.4
    Conserved Domains (1) summary
    pfam01248
    Location:23 → 118
    Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Nucleotide Protein Strain
Heading Accession and Version

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