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LOC6531417 alpha-N-acetylgalactosaminidase [ Drosophila yakuba ]

Gene ID: 6531417, updated on 10-May-2024

Summary

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Gene symbol
LOC6531417
Gene description
alpha-N-acetylgalactosaminidase
Locus tag
Dyak_GE14068
See related
EnsemblRapid:LOC6531417
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila yakuba
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GE14068; GE14068-PA; GE14068-PB; GE14068-PC
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: 2R
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Prin_Dyak_Tai18E2_2.1 (GCF_016746365.2) 2R NC_052528.2 (19434484..19437695)
101 previous assembly Prin_Dyak_Tai18E2_2.0 (GCF_016746365.1) 2R NC_052528.1 (19434515..19437728)

Chromosome 2R - NC_052528.2Genomic Context describing neighboring genes Neighboring gene nuclear pore glycoprotein p62 Neighboring gene U3 small nucleolar RNA-associated protein 18 homolog wicked Neighboring gene hydroxymethylglutaryl-CoA synthase 1 Neighboring gene V-type proton ATPase subunit Vha44

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-galactosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminidase
Names
Dyak\GE14068
Dyak\GE14068-PA
Dyak\GE14068-PB
Dyak\GE14068-PC
dyak_GLEANR_14221

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila yakuba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

Genomic

  1. NC_052528.2 Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

    Range
    19434484..19437695
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015195832.3 → XP_015051318.1  alpha-N-acetylgalactosaminidase

    UniProtKB/TrEMBL
    B4P682
    Related
    XP_015051318.1, XM_015195832.3
    Conserved Domains (1) summary
    cl07893
    Location:31 → 408
    AmyAc_family; Alpha amylase catalytic domain family

  2. XM_015195831.3 → XP_015051317.1  alpha-N-acetylgalactosaminidase

    UniProtKB/TrEMBL
    B4P682
    Related
    XP_015051317.1, XM_015195831.3
    Conserved Domains (1) summary
    cl07893
    Location:31 → 408
    AmyAc_family; Alpha amylase catalytic domain family

  3. XM_002092184.4 → XP_002092220.1  alpha-N-acetylgalactosaminidase

    See identical proteins and their annotated locations for XP_002092220.1

    UniProtKB/TrEMBL
    B4P682
    Related
    XP_002092220.1, XM_002092184.4
    Conserved Domains (1) summary
    cl07893
    Location:31 → 408
    AmyAc_family; Alpha amylase catalytic domain family
Nucleotide Protein Strain
Heading Accession and Version

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