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LOC6525679 probable ATP-dependent RNA helicase CG8611 [ Drosophila yakuba ]

Gene ID: 6525679, updated on 10-May-2024

Summary

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Gene symbol
LOC6525679
Gene description
probable ATP-dependent RNA helicase CG8611
Locus tag
Dyak_GE15594
See related
EnsemblRapid:LOC6525679
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila yakuba
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GE15594; GE15594-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6525679 in Genome Data Viewer
Location:
chromosome: X
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Prin_Dyak_Tai18E2_2.1 (GCF_016746365.2) X NC_052526.2 (16451733..16460032, complement)
101 previous assembly Prin_Dyak_Tai18E2_2.0 (GCF_016746365.1) X NC_052526.1 (16451763..16460066, complement)

Chromosome X - NC_052526.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC26535402 Neighboring gene homeobox protein BarH1 Neighboring gene uncharacterized LOC6525680 Neighboring gene cytosolic endo-beta-N-acetylglucosaminidase Neighboring gene uncharacterized LOC6525682

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent RNA helicase CG8611
Names
Dyak\GE15594
Dyak\GE15594-PA
dyak_GLEANR_17095

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila yakuba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

Genomic

  1. NC_052526.2 Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

    Range
    16451733..16460032 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002101465.4 → XP_002101501.1  probable ATP-dependent RNA helicase CG8611

    See identical proteins and their annotated locations for XP_002101501.1

    UniProtKB/TrEMBL
    B4Q2A1
    Related
    XP_002101501.1, XM_002101465.4
    Conserved Domains (4) summary
    smart00487
    Location:339 → 545
    DEXDc; DEAD-like helicases superfamily
    cd00079
    Location:592 → 748
    HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
    pfam13959
    Location:796 → 857
    DUF4217; Domain of unknown function (DUF4217)
    cl21455
    Location:323 → 539
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein Strain
Heading Accession and Version

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