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LOC6506615 sodium- and chloride-dependent GABA transporter ine [ Drosophila ananassae ]

Gene ID: 6506615, updated on 10-May-2024

Summary

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Gene symbol
LOC6506615
Gene description
sodium- and chloride-dependent GABA transporter ine
Locus tag
Dana_GF23979
See related
EnsemblRapid:LOC6506615
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila ananassae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GF23979; GF23979-PA; GF23979-PB; GF23979-PC
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: 3R
Exon count:
11
Annotation release Status Assembly Chr Location
102 current ASM1763931v2 (GCF_017639315.1) 3R NC_057930.1 (10740593..10750326)
101 previous assembly DanaRS2.1 (GCF_003285975.2) Unplaced Scaffold NW_022473445.1 (3188819..3198551)

Chromosome 3R - NC_057930.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC26514031 Neighboring gene uncharacterized LOC6506596 Neighboring gene polyphosphoinositide phosphatase Neighboring gene zinc finger protein 629 Neighboring gene zinc finger protein 501

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables neurotransmitter:sodium symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables osmosensor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glial cell growth IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neurotransmitter transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmission of nerve impulse IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium- and chloride-dependent GABA transporter ine
Names
Dana\GF23979
Dana\GF23979-PA
Dana\GF23979-PB
Dana\GF23979-PC
dana_GLEANR_874

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila ananassae Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1763931v2

Genomic

  1. NC_057930.1 Reference ASM1763931v2

    Range
    10740593..10750326
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044716640.1 → XP_044572575.1  sodium- and chloride-dependent GABA transporter ine isoform X1

    UniProtKB/TrEMBL
    B3MU16
    Related
    XP_044572575.1, XM_044716640.1
    Conserved Domains (1) summary
    cl00456
    Location:333 → 872
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  2. XM_014905087.3 → XP_014760573.1  sodium- and chloride-dependent GABA transporter ine isoform X1

    UniProtKB/TrEMBL
    B3MU16
    Related
    XP_014760573.1, XM_014905087.3
    Conserved Domains (1) summary
    cl00456
    Location:333 → 872
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  3. XM_014905086.3 → XP_014760572.1  sodium- and chloride-dependent GABA transporter ine isoform X2

    UniProtKB/TrEMBL
    A0A0P9A7T6
    Related
    XP_014760572.1, XM_014905086.3
    Conserved Domains (1) summary
    cl00456
    Location:52 → 591
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
Nucleotide Protein Strain
Heading Accession and Version

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