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Srp54k signal recognition particle 54k [ Drosophila ananassae ]

Gene ID: 6506608, updated on 22-May-2024

Summary

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Gene symbol
Srp54k
Gene description
signal recognition particle 54k
Locus tag
Dana_GF23972
See related
EnsemblRapid:LOC6506608
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila ananassae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GF23972; GF23972-PA
Orthologs
fruit fly all
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Genomic context

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See Srp54k in Genome Data Viewer
Location:
chromosome: 2R
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM1763931v2 (GCF_017639315.1) 2R NC_057928.1 (13621988..13624097)
101 previous assembly DanaRS2.1 (GCF_003285975.2) Unplaced Scaffold NW_022473439.1 (13421774..13423866, complement)

Chromosome 2R - NC_057928.1Genomic Context describing neighboring genes Neighboring gene flap endonuclease GEN Neighboring gene alanine--tRNA ligase, mitochondrial Neighboring gene protein alan shepard Neighboring gene probable nuclear transport factor 2 Neighboring gene uncharacterized LOC6506610

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 7S RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables endoplasmic reticulum signal peptide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SRP-dependent cotranslational protein targeting to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in SRP-dependent cotranslational protein targeting to membrane, translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of signal recognition particle, endoplasmic reticulum targeting IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
signal recognition particle 54 kDa protein
Names
Dana\GF23972
Dana\GF23972-PA
dana_GLEANR_8733

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila ananassae Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1763931v2

Genomic

  1. NC_057928.1 Reference ASM1763931v2

    Range
    13621988..13624097
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001957518.4 → XP_001957554.1  signal recognition particle 54 kDa protein

    See identical proteins and their annotated locations for XP_001957554.1

    UniProtKB/TrEMBL
    B3M3R7
    Related
    XP_001957554.1, XM_001957518.4
    Conserved Domains (4) summary
    TIGR01425
    Location:2 → 428
    SRP54_euk; signal recognition particle protein SRP54
    pfam00448
    Location:102 → 294
    SRP54; SRP54-type protein, GTPase domain
    pfam02881
    Location:6 → 83
    SRP54_N; SRP54-type protein, helical bundle domain
    pfam02978
    Location:327 → 428
    SRP_SPB; Signal peptide binding domain
Nucleotide Protein Strain
Heading Accession and Version

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