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LOC6504559 pescadillo homolog [ Drosophila ananassae ]

Gene ID: 6504559, updated on 10-May-2024

Summary

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Gene symbol
LOC6504559
Gene description
pescadillo homolog
Locus tag
Dana_GF21889
See related
EnsemblRapid:LOC6504559
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila ananassae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GF21889; GF21889-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6504559 in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
4
Annotation release Status Assembly Chr Location
102 current ASM1763931v2 (GCF_017639315.1) 3R NC_057930.1 (8512631..8514970, complement)
101 previous assembly DanaRS2.1 (GCF_003285975.2) Unplaced Scaffold NW_022473445.1 (961097..963436, complement)

Chromosome 3R - NC_057930.1Genomic Context describing neighboring genes Neighboring gene protein pelota Neighboring gene uncharacterized LOC6504560 Neighboring gene NHP2-like protein 1 hoip Neighboring gene sodium/potassium/calcium exchanger Nckx30C Neighboring gene uncharacterized LOC6505447 Neighboring gene uncharacterized LOC6505449

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PeBoW complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pescadillo homolog
Names
Dana\GF21889
Dana\GF21889-PA
dana_GLEANR_587

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila ananassae Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1763931v2

Genomic

  1. NC_057930.1 Reference ASM1763931v2

    Range
    8512631..8514970 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001964874.3 → XP_001964910.1  pescadillo homolog

    See identical proteins and their annotated locations for XP_001964910.1

    UniProtKB/Swiss-Prot
    B3MUX9
    Related
    XP_001964910.1, XM_001964874.3
    Conserved Domains (3) summary
    COG5163
    Location:1 → 601
    NOP7; Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis]
    pfam06732
    Location:7 → 260
    Pescadillo_N; Pescadillo N-terminus
    pfam16589
    Location:323 → 413
    BRCT_2; BRCT domain, a BRCA1 C-terminus domain
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B3MUX9.1 GenPept UniProtKB/Swiss-Prot:B3MUX9

Gene LinkOut

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Molecular Biology Databases
Research Materials