U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AlkB alpha-ketoglutarate-dependent dioxygenase AlkB [ Drosophila ananassae ]

Gene ID: 6502849, updated on 23-May-2024

Summary

Go to the top of the page Help
Gene symbol
AlkB
Gene description
alpha-ketoglutarate-dependent dioxygenase AlkB
Locus tag
Dana_GF20132
See related
EnsemblRapid:LOC6502849
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila ananassae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GF20132; GF20132-PA
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See AlkB in Genome Data Viewer
Location:
chromosome: 2R
Exon count:
1
Annotation release Status Assembly Chr Location
102 current ASM1763931v2 (GCF_017639315.1) 2R NC_057928.1 (8263298..8265121, complement)
101 previous assembly DanaRS2.1 (GCF_003285975.2) Unplaced Scaffold NW_022473439.1 (18797232..18798364)

Chromosome 2R - NC_057928.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein CG13380 Neighboring gene ubiquitin carboxyl-terminal hydrolase nonstop Neighboring gene transfer RNA proline (anticodon CGG) Neighboring gene aurora kinase A activator-like protein bora Neighboring gene Myosin phosphatase targeting subunit 75D

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables broad specificity oxidative DNA demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferrous iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidative RNA demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in oxidative RNA demethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
nucleic acid dioxygenase ALKBH1
Names
Dana\GF20132
Dana\GF20132-PA
dana_GLEANR_22537

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Drosophila ananassae Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1763931v2

Genomic

  1. NC_057928.1 Reference ASM1763931v2

    Range
    8263298..8265121 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001958184.4 → XP_001958220.1  nucleic acid dioxygenase ALKBH1

    See identical proteins and their annotated locations for XP_001958220.1

    UniProtKB/TrEMBL
    B3M887
    Related
    XP_001958220.1, XM_001958184.4
    Conserved Domains (1) summary
    cl21496
    Location:137 → 258
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials