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LOC6502232 histone-lysine N-methyltransferase trr [ Drosophila ananassae ]

Gene ID: 6502232, updated on 30-Nov-2023

Summary

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Gene symbol
LOC6502232
Gene description
histone-lysine N-methyltransferase trr
Locus tag
Dana_GF19475
See related
EnsemblRapid:LOC6502232
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila ananassae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GF19475; GF19475-PA
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Genomic context

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Location:
chromosome: XL
Exon count:
7
Annotation release Status Assembly Chr Location
102 current ASM1763931v2 (GCF_017639315.1) XL NC_057931.1 (6402640..6411673)
101 previous assembly DanaRS2.1 (GCF_003285975.2) Unplaced Scaffold NW_022473283.1 (2397503..2406398)

Chromosome XL - NC_057931.1Genomic Context describing neighboring genes Neighboring gene armadillo segment polarity protein Neighboring gene 39S ribosomal protein L16, mitochondrial Neighboring gene COA8 family protein CG14806, mitochondrial Neighboring gene UPF0184 protein CG14818 Neighboring gene WD repeat-containing protein 18

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nBAF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-lysine N-methyltransferase trr
Names
Dana\GF19475
Dana\GF19475-PA
dana_GLEANR_21516

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila ananassae Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1763931v2

Genomic

  1. NC_057931.1 Reference ASM1763931v2

    Range
    6402640..6411673
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001965994.4 → XP_001966030.1  histone-lysine N-methyltransferase trr

    See identical proteins and their annotated locations for XP_001966030.1

    UniProtKB/TrEMBL
    B3MXH4
    Related
    XP_001966030.1, XM_001965994.4
    Conserved Domains (6) summary
    smart00317
    Location:2350 → 2472
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
    smart00508
    Location:2474 → 2490
    PostSET; Cysteine-rich motif following a subset of SET domains
    COG2940
    Location:2325 → 2490
    SET; SET domain-containing protein (function unknown) [General function prediction only]
    pfam05964
    Location:2127 → 2177
    FYRN; F/Y-rich N-terminus
    pfam05965
    Location:2183 → 2266
    FYRC; F/Y rich C-terminus
    cl22851
    Location:1950 → 2051
    PHD_SF; PHD finger superfamily

RNA

  1. XR_001408340.3 RNA Sequence

    Related
    XR_001408340.3

  2. XR_001408339.3 RNA Sequence

    Related
    XR_001408339.3
Nucleotide Protein Strain
Heading Accession and Version

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