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LOC6500476 succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial [ Drosophila ananassae ]

Gene ID: 6500476, updated on 10-May-2024

Summary

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Gene symbol
LOC6500476
Gene description
succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial
Locus tag
Dana_GF17693
See related
EnsemblRapid:LOC6500476
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila ananassae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GF17693; GF17693-PA; GF17693-PB; GF17693-PC; GF17693-PD; GF17693-PE
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: 2L
Exon count:
10
Annotation release Status Assembly Chr Location
102 current ASM1763931v2 (GCF_017639315.1) 2L NC_057927.1 (3537851..3542193)
101 previous assembly DanaRS2.1 (GCF_003285975.2) Unplaced Scaffold NW_022473262.1 (3560342..3564550)

Chromosome 2L - NC_057927.1Genomic Context describing neighboring genes Neighboring gene tight junction protein ZO-1 Neighboring gene uncharacterized LOC123257297 Neighboring gene maternal effect protein oskar Neighboring gene beta-catenin-like protein 1 Neighboring gene ichor Neighboring gene uncharacterized LOC123256994 Neighboring gene beta carbonic anhydrase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables succinate-CoA ligase (ADP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in succinyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of succinate-CoA ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial
Names
Dana\GF17693
Dana\GF17693-PA
Dana\GF17693-PB
Dana\GF17693-PC
Dana\GF17693-PD
Dana\GF17693-PE
dana_GLEANR_18955

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila ananassae Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1763931v2

Genomic

  1. NC_057927.1 Reference ASM1763931v2

    Range
    3537851..3542193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014911090.3 → XP_014766576.1  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A0N8P1A9, A0A0P8XXK4
    Related
    XP_014766576.1, XM_014911090.3
    Conserved Domains (3) summary
    PLN00124
    Location:28 → 427
    PLN00124; succinyl-CoA ligase [GDP-forming] subunit beta; Provisional
    pfam00549
    Location:307 → 427
    Ligase_CoA; CoA-ligase
    cl17255
    Location:39 → 247
    ATP-grasp_4; ATP-grasp domain

  2. XM_044714229.1 → XP_044570164.1  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A0P8XXD0, A0A0P8XXK4
    Related
    XP_044570164.1, XM_044714229.1
    Conserved Domains (1) summary
    PLN00124
    Location:28 → 426
    PLN00124; succinyl-CoA ligase [GDP-forming] subunit beta; Provisional

  3. XM_014911089.3 → XP_014766575.1  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A0N8P1A9, A0A0P8XXK4
    Related
    XP_014766575.1, XM_014911089.3
    Conserved Domains (3) summary
    PLN00124
    Location:28 → 427
    PLN00124; succinyl-CoA ligase [GDP-forming] subunit beta; Provisional
    pfam00549
    Location:307 → 427
    Ligase_CoA; CoA-ligase
    cl17255
    Location:39 → 247
    ATP-grasp_4; ATP-grasp domain

  4. XM_001953263.4 → XP_001953298.1  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial isoform X2

    See identical proteins and their annotated locations for XP_001953298.1

    UniProtKB/TrEMBL
    A0A0P8XXK4, B3LZ07
    Related
    XP_001953298.1, XM_001953263.4
    Conserved Domains (3) summary
    PLN00124
    Location:28 → 426
    PLN00124; succinyl-CoA ligase [GDP-forming] subunit beta; Provisional
    pfam00549
    Location:306 → 426
    Ligase_CoA; CoA-ligase
    cl17255
    Location:39 → 247
    ATP-grasp_4; ATP-grasp domain
Nucleotide Protein Strain
Heading Accession and Version

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