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Npl4 nuclear protein localization 4 [ Drosophila ananassae ]

Gene ID: 6500051, updated on 23-May-2024

Summary

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Gene symbol
Npl4
Gene description
nuclear protein localization 4
Locus tag
Dana_GF17266
See related
EnsemblRapid:LOC6500051
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila ananassae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GF17266; GF17266-PA; GF17266-PB
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: 2L
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ASM1763931v2 (GCF_017639315.1) 2L NC_057927.1 (3724464..3738986, complement)
101 previous assembly DanaRS2.1 (GCF_003285975.2) Unplaced Scaffold NW_022473262.1 (3745467..3759881, complement)

Chromosome 2L - NC_057927.1Genomic Context describing neighboring genes Neighboring gene splicing factor 3B subunit 4 Neighboring gene pancreatic triacylglycerol lipase Neighboring gene uncharacterized LOC6500052 Neighboring gene uncharacterized LOC6502655 Neighboring gene adenylate cyclase, terminal-differentiation specific Neighboring gene uncharacterized LOC123258385 Neighboring gene succinic semialdehyde dehydrogenase Neighboring gene jing interacting gene regulatory 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear protein localization protein 4 homolog
Names
Dana\GF17266
Dana\GF17266-PA
Dana\GF17266-PB
dana_GLEANR_18533

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila ananassae Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1763931v2

Genomic

  1. NC_057927.1 Reference ASM1763931v2

    Range
    3724464..3738986 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014910869.3 → XP_014766355.1  nuclear protein localization protein 4 homolog isoform X2

    UniProtKB/TrEMBL
    A0A0P8XXL7
    Related
    XP_014766355.1, XM_014910869.3
    Conserved Domains (6) summary
    smart00547
    Location:603 → 627
    ZnF_RBZ; Zinc finger domain
    COG5100
    Location:5 → 569
    NPL4; Nuclear pore protein [Nuclear structure]
    sd00029
    Location:605 → 624
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05020
    Location:117 → 255
    zf-NPL4; NPL4 family, putative zinc binding region
    pfam05021
    Location:258 → 569
    NPL4; NPL4 family
    pfam11543
    Location:1 → 77
    UN_NPL4; Nuclear pore localization protein NPL4

  2. XM_001953278.4 → XP_001953313.1  nuclear protein localization protein 4 homolog isoform X1

    See identical proteins and their annotated locations for XP_001953313.1

    UniProtKB/TrEMBL
    B3LZ22
    Related
    XP_001953313.1, XM_001953278.4
    Conserved Domains (6) summary
    smart00547
    Location:632 → 656
    ZnF_RBZ; Zinc finger domain
    COG5100
    Location:35 → 598
    NPL4; Nuclear pore protein [Nuclear structure]
    sd00029
    Location:634 → 653
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05020
    Location:146 → 284
    zf-NPL4; NPL4 family, putative zinc binding region
    pfam05021
    Location:287 → 598
    NPL4; NPL4 family
    pfam11543
    Location:33 → 106
    UN_NPL4; Nuclear pore localization protein NPL4
Nucleotide Protein Strain
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