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Yif1 Yip1d-interacting factor 1 [ Drosophila ananassae ]

Gene ID: 6499247, updated on 23-May-2024

Summary

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Gene symbol
Yif1
Gene description
Yip1d-interacting factor 1
Locus tag
Dana_GF16451
See related
EnsemblRapid:LOC6499247
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila ananassae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GF16451; GF16451-PA; GF16451-PB; GF16451-PC
Orthologs
fruit fly all
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Genomic context

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See Yif1 in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
4
Annotation release Status Assembly Chr Location
102 current ASM1763931v2 (GCF_017639315.1) 2L NC_057927.1 (16898094..16900066, complement)
101 previous assembly DanaRS2.1 (GCF_003285975.2) Unplaced Scaffold NW_022473262.1 (16924276..16926248, complement)

Chromosome 2L - NC_057927.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6499250 Neighboring gene uncharacterized LOC6499249 Neighboring gene WD repeat-containing protein 20 Neighboring gene uncharacterized LOC6501341 Neighboring gene neuroendocrine convertase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein YIF1B-A
Names
Dana\GF16451
Dana\GF16451-PA
Dana\GF16451-PB
Dana\GF16451-PC
dana_GLEANR_17721

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila ananassae Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1763931v2

Genomic

  1. NC_057927.1 Reference ASM1763931v2

    Range
    16898094..16900066 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014910499.2 → XP_014765985.1  protein YIF1B-A isoform X3

    UniProtKB/TrEMBL
    A0A0P9CAS5
    Related
    XP_014765985.1, XM_014910499.2
    Conserved Domains (1) summary
    pfam03878
    Location:139 → 380
    YIF1; YIF1

  2. XM_001954992.3 → XP_001955028.1  protein YIF1B-A isoform X2

    See identical proteins and their annotated locations for XP_001955028.1

    UniProtKB/TrEMBL
    B3M3C8
    Related
    XP_001955028.1, XM_001954992.3
    Conserved Domains (1) summary
    pfam03878
    Location:143 → 384
    YIF1; YIF1

  3. XM_014910498.2 → XP_014765984.1  protein YIF1B-A isoform X1

    UniProtKB/TrEMBL
    A0A0P8YNK6
    Related
    XP_014765984.1, XM_014910498.2
    Conserved Domains (1) summary
    pfam03878
    Location:148 → 389
    YIF1; YIF1
Nucleotide Protein Strain
Heading Accession and Version

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