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LOC6493341 flap endonuclease GEN [ Drosophila ananassae ]

Gene ID: 6493341, updated on 10-May-2024

Summary

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Gene symbol
LOC6493341
Gene description
flap endonuclease GEN
Locus tag
Dana_GF10471
See related
EnsemblRapid:LOC6493341
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila ananassae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GF10471; GF10471-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6493341 in Genome Data Viewer
Location:
chromosome: 2R
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM1763931v2 (GCF_017639315.1) 2R NC_057928.1 (13619397..13621934, complement)
101 previous assembly DanaRS2.1 (GCF_003285975.2) Unplaced Scaffold NW_022473439.1 (13423931..13426459)

Chromosome 2R - NC_057928.1Genomic Context describing neighboring genes Neighboring gene ganglioside induced differentiation associated protein 1 Neighboring gene alanine--tRNA ligase, mitochondrial Neighboring gene acyl-coenzyme A diphosphatase Fitm Neighboring gene protein alan shepard Neighboring gene signal recognition particle 54k Neighboring gene probable nuclear transport factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-flap endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables four-way junction DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
flap endonuclease GEN
Names
Dana\GF10471
Dana\GF10471-PA
dana_GLEANR_10425

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila ananassae Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1763931v2

Genomic

  1. NC_057928.1 Reference ASM1763931v2

    Range
    13619397..13621934 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001957519.3 → XP_001957555.1  flap endonuclease GEN

    See identical proteins and their annotated locations for XP_001957555.1

    UniProtKB/TrEMBL
    B3M3R8
    Related
    XP_001957555.1, XM_001957519.3
    Conserved Domains (2) summary
    cd09869
    Location:1 → 387
    PIN_GEN1; PIN domain of Gap Endonuclease 1, a structure-specific, divalent-metal-ion dependent, 5' nuclease and homologs
    cl22433
    Location:212 → 344
    H3TH_StructSpec-5'-nucleases; H3TH domains of structure-specific 5' nucleases (or flap endonuclease-1-like) involved in DNA replication, repair, and recombination
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials