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PTRG_08793 serine/threonine-protein kinase crk1 [ Pyrenophora tritici-repentis Pt-1C-BFP ]

Gene ID: 6347079, updated on 28-Dec-2023

Summary

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Gene symbol
PTRG_08793
Gene description
serine/threonine-protein kinase crk1
Locus tag
PTRG_08793
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pyrenophora tritici-repentis Pt-1C-BFP (strain: Pt-1C-BFP)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Pyrenophora
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Genomic context

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See PTRG_08793 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_001939253.1Genomic Context describing neighboring genes Neighboring gene clathrin heavy chain Neighboring gene pyruvate carboxylase Neighboring gene U2 small nuclear ribonucleoprotein B Neighboring gene adenosine deaminase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001939253.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II CTD heptapeptide repeat kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIH holo complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIK complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase crk1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001939253.1 Reference assembly

    Range
    260549..261667 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001939090.1 → XP_001939125.1  serine/threonine-protein kinase crk1 [Pyrenophora tritici-repentis Pt-1C-BFP]

    See identical proteins and their annotated locations for XP_001939125.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2W1F656, B2WFT7
    Conserved Domains (2) summary
    smart00220
    Location:23 → 319
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd07841
    Location:22 → 333
    STKc_CDK7; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7
Nucleotide Protein
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