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PTRG_06260 structural maintenance of chromosomes protein 6 [ Pyrenophora tritici-repentis Pt-1C-BFP ]

Gene ID: 6344517, updated on 28-Dec-2023

Summary

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Gene symbol
PTRG_06260
Gene description
structural maintenance of chromosomes protein 6
Locus tag
PTRG_06260
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pyrenophora tritici-repentis Pt-1C-BFP (strain: Pt-1C-BFP)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Pyrenophora
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Genomic context

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See PTRG_06260 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
7

NW_001939249.1Genomic Context describing neighboring genes Neighboring gene anaphase-promoting complex subunit Apc2 Neighboring gene F-box domain containing protein Neighboring gene chitin synthase regulator 3 Neighboring gene arabinogalactan endo-1,4-beta-galactosidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001939249.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Smc5-Smc6 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
structural maintenance of chromosomes protein 6

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001939249.1 Reference assembly

    Range
    144677..148379 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001936558.1 → XP_001936593.1  structural maintenance of chromosomes protein 6 [Pyrenophora tritici-repentis Pt-1C-BFP]

    See identical proteins and their annotated locations for XP_001936593.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2W1EJS5, A0A2W1HLH7, B2W8F2
    Conserved Domains (1) summary
    COG1196
    Location:93 → 1108
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
Nucleotide Protein
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