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PODANS_1_6550 hypothetical protein [ Podospora anserina S mat+ ]

Gene ID: 6197298, updated on 17-May-2024

Summary

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Gene symbol
PODANS_1_6550
Gene description
hypothetical protein
Primary source
FungiDB:PODANS_1_6550
Locus tag
PODANS_1_6550
See related
VEuPathDB:PODANS_1_6550
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Podospora anserina S mat+ (strain: S mat+)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Lasiosphaeriaceae; Podospora
Old locus tag
PODANSg09922
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Genomic context

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See PODANS_1_6550 in Genome Data Viewer
Location:
chromosome: 1, map: unlocalized
Exon count:
3

NW_001914859.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001914859.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of the model ascomycete fungus Podospora anserina. Espagne E, et al. Genome Biol, 2008. PMID 18460219, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endosomal vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein targeting to vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of HOPS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001914859.1 Reference assembly

    Range
    2317882..2322884
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001912838.1 → XP_001912873.1  uncharacterized protein PODANS_1_6550 [Podospora anserina S mat+]

    See identical proteins and their annotated locations for XP_001912873.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B2AB93
    Conserved Domains (2) summary
    cd00162
    Location:1592 → 1626
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    pfam12816
    Location:733 → 936
    Vps8; Golgi CORVET complex core vacuolar protein 8
Nucleotide Protein
Heading Accession and Version

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